Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0498.Seq
(680 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 7e-34
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 140 7e-34
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 130 8e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 92 3e-19
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 64 8e-11
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 50 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 49 4e-06
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 30 1.5
SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3) 29 3.5
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_39920| Best HMM Match : K_tetra (HMM E-Value=1.9e-06) 29 4.6
SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 6.1
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 28 8.0
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 8.0
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 140 bits (340), Expect = 7e-34
Identities = 64/83 (77%), Positives = 77/83 (92%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+NA
Sbjct: 341 KYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNA 400
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQ 250
LF+ T+EPVEK+++D+K++ +
Sbjct: 401 HLFKKTLEPVEKAIKDSKLESKE 423
Score = 106 bits (255), Expect = 1e-23
Identities = 53/89 (59%), Positives = 58/89 (65%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
+IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPDE ILHGDKSE QD
Sbjct: 427 EIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLL 486
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSP 522
G+ETAGGVMT IKR P
Sbjct: 487 LLDVAPLTLGLETAGGVMTAAIKRNTTIP 515
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = +3
Query: 549 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
YSDNQ VLIQV+EGER++TKDNNLLGKFEL+GIPPAPRGVPQI
Sbjct: 525 YSDNQTSVLIQVYEGERSLTKDNNLLGKFELSGIPPAPRGVPQI 568
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 140 bits (340), Expect = 7e-34
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN
Sbjct: 248 KYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQ 307
Query: 182 DLFRSTMEPVEKSLRDAKM 238
DLF+ T EPVE+++RD+K+
Sbjct: 308 DLFKKTTEPVEQAIRDSKI 326
Score = 103 bits (248), Expect = 1e-22
Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
DIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE ILHGDK + V+D
Sbjct: 335 DIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLL 394
Query: 436 XXXXXXXXXGIETAGGVMTTLIKR--TLPS 519
GIETAGGVM+ LIKR T+P+
Sbjct: 395 LLDVAPLSMGIETAGGVMSVLIKRNSTIPT 424
Score = 90.6 bits (215), Expect = 1e-18
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 549 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
YSDNQPGVLIQVFEGER+MT NNLLGKFELTGIPPAPRGVPQI
Sbjct: 433 YSDNQPGVLIQVFEGERSMTAHNNLLGKFELTGIPPAPRGVPQI 476
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 130 bits (315), Expect = 8e-31
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
KYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L +
Sbjct: 249 KYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCS 308
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
DLF S ++PV K+L DAK K+ I
Sbjct: 309 DLFLSCLDPVNKALSDAKFSKSDI 332
Score = 96.7 bits (230), Expect = 2e-20
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE IL GDKS+EV+D
Sbjct: 334 EVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVL 393
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSP 522
GIETAG VMT LI+R P
Sbjct: 394 LVDVAPLSLGIETAGEVMTKLIERNARIP 422
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +3
Query: 549 YSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
YSDNQP V I+VFEGER +TK NNLLGKF+L+GIPPAPRGVPQI
Sbjct: 432 YSDNQPAVTIRVFEGERPLTKHNNLLGKFDLSGIPPAPRGVPQI 475
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 92.3 bits (219), Expect = 3e-19
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA
Sbjct: 945 KKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNA 1004
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
LF+ST++PV+K L DA + K++I
Sbjct: 1005 KLFKSTLKPVQKVLEDADLKKSEI 1028
Score = 78.2 bits (184), Expect = 6e-15
Identities = 42/92 (45%), Positives = 53/92 (57%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXX 435
+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE +L G+ E+ +
Sbjct: 1030 EIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVV 1087
Query: 436 XXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
GIET GGVMT LI R P +
Sbjct: 1088 LLDVNPLTLGIETVGGVMTKLISRNTVIPTKK 1119
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3
Query: 552 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
+DNQ V IQVFEGER MTKDN+ LGKF+L GIPPAPRGVPQI
Sbjct: 1127 ADNQNTVTIQVFEGERPMTKDNHPLGKFDLNGIPPAPRGVPQI 1169
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 64.5 bits (150), Expect = 8e-11
Identities = 38/96 (39%), Positives = 50/96 (52%)
Frame = +1
Query: 244 GSNPDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEV 423
G D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L GD V
Sbjct: 85 GEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD----V 139
Query: 424 QDXXXXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
+D GIET GGV T LI R P +
Sbjct: 140 KDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKK 175
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 552 SDNQPGVLIQVFEGERAMTKDNNLLGKFEL 641
+D Q V I+VF+GER M DN LLG+F+L
Sbjct: 183 ADGQTQVEIKVFQGEREMAIDNKLLGQFQL 212
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 149 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQI 253
++R++FE L ADL T+ P +K L+DA+++K +I
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEI 87
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 64.5 bits (150), Expect = 8e-11
Identities = 38/96 (39%), Positives = 50/96 (52%)
Frame = +1
Query: 244 GSNPDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEV 423
G D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE +L GD V
Sbjct: 140 GEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIGAAIQGGVLAGD----V 194
Query: 424 QDXXXXXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
+D GIET GGV T LI R P +
Sbjct: 195 KDVLLLDVTPLSLGIETLGGVFTKLITRNTTIPTKK 230
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +3
Query: 552 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 680
+D Q V I+VF+GER M DN LLG+F+L GIPPAPRGVPQ+
Sbjct: 238 ADGQTQVEIKVFQGEREMAIDNKLLGQFQLVGIPPAPRGVPQV 280
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +2
Query: 14 DLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNA 181
DL+ + AL+RLR A E+AK LSSS Q I + + ++R++FE L A
Sbjct: 59 DLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVA 118
Query: 182 DLFRSTMEPVEKSLRDAKMDKAQI 253
DL T+ P +K L+DA+++K +I
Sbjct: 119 DLINRTVGPCKKCLQDAEINKGEI 142
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNA 181
K+K ++ + RA+ + R K+ LS++ + +I+ +F+G DF +TR EE+
Sbjct: 232 KFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQ 291
Query: 182 DLFRSTMEPVEKSLRDAKM 238
DLF PV ++L+ A M
Sbjct: 292 DLFDRVAGPVNRALKSASM 310
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 259 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
+VLVGG R+PKVQ L EL K+IN DE
Sbjct: 318 VVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = +1
Query: 259 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXX 438
++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K ++
Sbjct: 43 VILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKEADMITEIE 102
Query: 439 XXXXXXXXGIETAGGVMTTLIKRTLPSPLNR 531
+ M +I + P PL R
Sbjct: 103 TMSKAICVSVGGESSRMIPVIPQYCPYPLRR 133
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 50.4 bits (115), Expect = 1e-06
Identities = 19/34 (55%), Positives = 31/34 (91%)
Frame = +1
Query: 256 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 357
++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+
Sbjct: 366 EVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +2
Query: 38 LRRLRTACERAKRTLSSSTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRSTM 202
++RLR E AK L+ + + +I++ SL EG + F +I+R FE +N DLF+ +
Sbjct: 288 IQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVL 347
Query: 203 EPVEKSLRDAKMDKAQI 253
+P+ + L + ++ K ++
Sbjct: 348 QPIRRVLAEVELPKEEV 364
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 157
K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 214 KWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 2 KYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELN 178
KYK D+ ++ +A +L CE+ K+ +S++T + I I+ E D + + RA+FEEL
Sbjct: 308 KYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELA 367
Query: 179 ADLFRSTMEPVEKSL 223
ADL + P+ +L
Sbjct: 368 ADLLKLVEAPLRSAL 382
>SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 259 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 360
+ +VGGSTRIP ++ ++++ F GKEL ++N DE
Sbjct: 10 VEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 465 TEGKGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEIL 310
T G I+QQQ LRLVT Q + ++ + L ++ FV LL K ++
Sbjct: 9 TAGAAVAIEQQQDSAYLRLVTPQRTETETYVVLCNLRQLQTFVSLLIAKYLI 60
>SB_8091| Best HMM Match : C1_4 (HMM E-Value=1.3)
Length = 308
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 249 KSRYCTGGWLHSYPQGAEAPARFL 320
K RYC G LH PQ + PA L
Sbjct: 202 KERYCIKGPLHRLPQAVQEPATIL 225
>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 468 NTEGKGCYIKQQQILHLL--RLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLH 295
+ EG G ++Q ++ L ++ VQ +S D C +YG+V + L S +E L+ LH
Sbjct: 463 HVEGAGFRERKQVLVTSLLSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLH 521
Query: 294 LGDTSGATHQ 265
L T T Q
Sbjct: 522 LLQTMWETMQ 531
>SB_39920| Best HMM Match : K_tetra (HMM E-Value=1.9e-06)
Length = 270
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 484 VMTTLIKRTLPSPLNRLRHSPPTLITNPEYS 576
V+ TL+++ +PSP N L+ ++ NPE S
Sbjct: 78 VLPTLLEKEIPSPKNMLQRKIWQMLENPESS 108
>SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 661 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 575
G GG PV+S SKL++ VIA SN+++
Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 110 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 229
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = +2
Query: 2 KYKKDLATNKRALRRL-----RTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARF 166
K KKDLA K L L RT E KRT+ Q ++ + E T A F
Sbjct: 233 KTKKDLAETKNQLTALTSNEIRTINENTKRTVDGLEQKMAKVMADCEAARASQDATLAEF 292
Query: 167 EELNADLFRSTMEPVEKSLRDAKMDKAQ 250
E + + K + MD ++
Sbjct: 293 ENYKTRVHSVLKQQKTKPVHSPDMDPSE 320
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 511 LPSPLNRLRHSPPTLITNP 567
LP N + H+PPT + NP
Sbjct: 760 LPDTANEIEHAPPTTVINP 778
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,121,671
Number of Sequences: 59808
Number of extensions: 464469
Number of successful extensions: 3632
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3627
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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