Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0498.Seq
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   6.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = +2

Query: 194 STMEPVEKSLRDAKMDKAQIPILYWWVAPLVSPRCRSSCKISLME 328
           S+  P+++ L+D  +       L+  +AP + P+     + S ME
Sbjct: 5   SSTNPIDEGLQDLGVPVPVQTFLWQQIAPFIRPKLGKLHEASCME 49


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = -1

Query: 359 SSGLIDLLSSFPLKKSCRSFCTLGIRVEPPTSTISGFEPYPSWHHGETSP 210
           S GL    +  P+ +     C L        S  SG    PS+ H E SP
Sbjct: 396 SYGLPQQQNQCPIHRIQHCTCMLQNNARESISPASGTGMSPSYPHSEPSP 445


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,926
Number of Sequences: 2352
Number of extensions: 14044
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)