Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0497.Seq
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    36   0.95 
UniRef50_Q4YNW0 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    33   5.0  
UniRef50_Q0PVD7 Cluster: Lst1p; n=1; Pichia pastoris|Rep: Lst1p ...    33   5.0  
UniRef50_A2DC58 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  

>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 35.5 bits (78), Expect = 0.95
 Identities = 16/20 (80%), Positives = 16/20 (80%)
 Frame = -1

Query: 61 FHQSRTKVRGSKAIRYRPSS 2
          F   RTKVRGSK IRYRPSS
Sbjct: 6  FRCQRTKVRGSKTIRYRPSS 25


>UniRef50_Q4YNW0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 575

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +3

Query: 63  HLWQMLSLKFVLRRSKNYTSNVAIRIHPVIPINHYLGVLKTNKIEP-RSYSIIPCTKYSS 239
           H+++ +  K++   + N  +N  I+I     +NH+L ++ +NK+   + Y +I    + S
Sbjct: 102 HIFKTIEEKYICSTNNNNKANEQIQIEEKSVLNHFLYLMDSNKLNSIKEYQMI-YIDFDS 160

Query: 240 SIFSPFEHSNL 272
            IF   +  N+
Sbjct: 161 CIFDTIQKMNI 171


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 509 TRLALQLFLGKIFKVYSFRLRGLVRV 586
           TRLALQ  L K FKV SF+L+GL RV
Sbjct: 63  TRLALQWILVKGFKVDSFQLQGLERV 88


>UniRef50_Q0PVD7 Cluster: Lst1p; n=1; Pichia pastoris|Rep: Lst1p -
           Pichia pastoris (Yeast)
          Length = 919

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +3

Query: 78  LSLKFVLRRSKNYTSNVAIRIHPVIPINHYLGVLKTNKIEPRSYSIIPCTKYSSSIFSPF 257
           +SL   ++  K Y S + IR    + +  YLG  KT+  +  +  +IP    ++S+   F
Sbjct: 527 ISLLDSIQAVKGYQSQLKIRCSAGLQVTKYLGSFKTSNSD--ADPLIPIVTSNTSVGCLF 584

Query: 258 EHSNLFKVKLSAH 296
           +H      K  AH
Sbjct: 585 KHDGKLSTKNDAH 597


>UniRef50_A2DC58 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 3355

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 39   TFVLD**KHLWQMLS--LKFVLRRSKNYTSNVAIRIHPVIPINHYLGVLKTNKIEPRSYS 212
            TF+LD  K  W  +   L F L  S+N  ++     H    +N+YL   KTNK    +++
Sbjct: 2044 TFILDMNKMNWDEVFDVLSFFLFNSENTLASTYFDQHEFTILNNYLNTEKTNKANRENFN 2103

Query: 213  II 218
            ++
Sbjct: 2104 LL 2105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,494,157
Number of Sequences: 1657284
Number of extensions: 9639536
Number of successful extensions: 20974
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20967
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)