Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0496.Seq
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    28   0.069
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   4.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.0  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 598 LHRPFNVMCNEDDPHTPSLPLLTSIDKPETLTCSTNS 708
           + RPF V  N   PHT  + +L S++K ETL    N+
Sbjct: 481 MSRPFEVRFN---PHTGRVEVLDSVEKLETLVHQLNT 514


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 461 T*LTSIKINYH-HYNSRQDEREMH 529
           T + ++ +NY+ H   R+DERE +
Sbjct: 392 TLIATVTVNYYRHKQKRRDERERY 415


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 673 DKPETLTCSTNSLTILQKLNT 735
           D+PE L+  +NS+T+   ++T
Sbjct: 28  DEPENLSNKSNSITVPLSIST 48


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 382 DHNEPFHKTGTAIRTVS--EC*IHNSLDYLINFDKN 483
           D N PFH  G + R V+      H ++  ++  D+N
Sbjct: 529 DANHPFHLHGHSFRVVAMERVGSHVNVSEILKMDQN 564


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 97  FFHQIKKRSLFAALSIIYIVFLNRVSTISSKLI 195
           FFH      LF+ ++  + +FLN  + I   L+
Sbjct: 99  FFHSFMTSVLFSQVASRWPLFLNEWTKIEINLL 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,625
Number of Sequences: 336
Number of extensions: 3480
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)