Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0496.Seq
         (751 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83231-5|CAB05753.1|  239|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr...    31   0.66 
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr...    31   0.66 
AL023847-9|CAA19553.1|  239|Caenorhabditis elegans Hypothetical ...    31   0.66 
AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical ...    31   0.87 

>Z83231-5|CAB05753.1|  239|Caenorhabditis elegans Hypothetical
           protein Y57A10C.1 protein.
          Length = 239

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 599 SCSLFTLHWHHRILKITAVIIFTCAFLFHLGDYCNDDSLFLSKL 468
           +CS    HW   IL +TA+ I T   LF     CN DS+  S++
Sbjct: 163 TCSRDLNHWPTNILILTAINIMTIPALFVAFYACNADSIHSSRV 206


>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
           protein T23F2.2b protein.
          Length = 1538

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 607 PFNVMCNEDDPHTPS---LPLLTSIDKPETLTCSTNSLTILQ 723
           P +++ +  D H+PS   +PL+T  +K +T+ CS  +L  +Q
Sbjct: 355 PLSIIASHPDLHSPSPMMIPLVTGDNKNQTIYCSQEALNHIQ 396


>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
           protein T23F2.2a protein.
          Length = 1534

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 607 PFNVMCNEDDPHTPS---LPLLTSIDKPETLTCSTNSLTILQ 723
           P +++ +  D H+PS   +PL+T  +K +T+ CS  +L  +Q
Sbjct: 355 PLSIIASHPDLHSPSPMMIPLVTGDNKNQTIYCSQEALNHIQ 396


>AL023847-9|CAA19553.1|  239|Caenorhabditis elegans Hypothetical
           protein Y57A10C.1 protein.
          Length = 239

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 599 SCSLFTLHWHHRILKITAVIIFTCAFLFHLGDYCNDDSLFLSKL 468
           +CS    HW   IL +TA+ I T   LF     CN DS+  S++
Sbjct: 163 TCSRDLNHWPTNILILTAINIMTIPALFVAFYACNADSIHSSRV 206


>AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical
           protein W06H8.4 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -1

Query: 544 LSYLHVHFSFILATIVMMIVYF 479
           LSY HV FSF  A+++ M++YF
Sbjct: 231 LSYYHVVFSFTFASLLFMLLYF 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,189,817
Number of Sequences: 27780
Number of extensions: 334201
Number of successful extensions: 690
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)