Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0494.Seq
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.6  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    22   4.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   6.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 116 FLQRVAVSLIKIAISENFDSAYHQREFLRLLAKAE 220
           +L  V+V LI +   ENF S      F+R L K++
Sbjct: 11  YLIPVSVILISVGWWENFVSETSYLPFIRALGKSK 45


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 116 FLQRVAVSLIKIAISENFDSAYHQREFLRLLAKAE 220
           +L  V+V LI +   ENF S      F+R L K++
Sbjct: 244 YLIPVSVILISVGWWENFVSETSYLPFIRALGKSK 278


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 116 FLQRVAVSLIKIAISENFDSAYHQREFLRLLAKAE 220
           +L  V+V LI +   ENF S      F+R L K++
Sbjct: 244 YLIPVSVILISVGWWENFVSETSYLPFIRALGKSK 278


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 593 LGEDKRSRSEILFPKD 640
           LGED R++   L PKD
Sbjct: 69  LGEDVRTQKGYLIPKD 84


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 116 ILLTFATTTCWTPRYI 69
           I++      CWTP Y+
Sbjct: 278 IIIVLVFFVCWTPYYV 293


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -2

Query: 116 ILLTFATTTCWTPRYI 69
           I++      CWTP Y+
Sbjct: 278 IIIVLVFFVCWTPYYV 293


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 704 NVECVLLKPNRTA 742
           N ECV+ K NRTA
Sbjct: 45  NGECVINKKNRTA 57


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/32 (25%), Positives = 13/32 (40%)
 Frame = +3

Query: 624 FYSLKIIMNWFEENLEYGRLREEIEHSMWNAY 719
           FY L +++  F    +         H +WN Y
Sbjct: 328 FYWLLVMVAMFSRTQQSANKTATFVHEIWNKY 359


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/32 (25%), Positives = 13/32 (40%)
 Frame = +3

Query: 624 FYSLKIIMNWFEENLEYGRLREEIEHSMWNAY 719
           FY L +++  F    +         H +WN Y
Sbjct: 284 FYWLLVMVAMFSRTQQSANKTATFVHEIWNKY 315


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,777
Number of Sequences: 336
Number of extensions: 2959
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)