Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0493.Seq
(618 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07) 31 0.75
SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 31 0.99
SB_36051| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_37048| Best HMM Match : Phage_tube (HMM E-Value=7.3) 30 1.3
SB_20156| Best HMM Match : GED (HMM E-Value=6.8e-16) 30 1.3
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 30 1.3
SB_4516| Best HMM Match : rve (HMM E-Value=6.5) 30 1.3
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 30 1.7
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 30 1.7
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37120| Best HMM Match : EB (HMM E-Value=4.2) 30 1.7
SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 2.3
SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7) 29 2.3
SB_29642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_53641| Best HMM Match : rve (HMM E-Value=7.9e-14) 29 3.0
SB_31102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_25791| Best HMM Match : GASA (HMM E-Value=9.9) 29 3.0
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_4506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_59489| Best HMM Match : RnaseH (HMM E-Value=0.0047) 29 3.0
SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25) 29 3.0
SB_54350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51440| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_16804| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26) 29 3.0
SB_4690| Best HMM Match : rve (HMM E-Value=1.5) 29 3.0
SB_4584| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015) 28 5.3
SB_18896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11755| Best HMM Match : GST_C (HMM E-Value=2.7e-05) 28 5.3
SB_11561| Best HMM Match : HAT (HMM E-Value=1.1) 28 5.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 5.3
SB_38092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_36310| Best HMM Match : DEAD (HMM E-Value=1.4) 28 5.3
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_19120| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 28 7.0
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 28 7.0
SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 28 7.0
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 28 7.0
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_44929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_19775| Best HMM Match : Arm (HMM E-Value=0.27) 27 9.2
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 27 9.2
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 27 9.2
SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 27 9.2
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)
Length = 1213
Score = 31.1 bits (67), Expect = 0.75
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 250 ENKSKPLPPELIAINTPNAQGRKAIQNVIH-NIQQLVKGVSASDPTEVASAPLPAKFEPP 426
E+ + P + A N G + + ++ ++ V + T + P K EP
Sbjct: 525 ESPALHTPENVGASERANTSGSEVLSKLLSGSVTSCVSSTPSGPSTFILYIPSFRKIEPK 584
Query: 427 IE---KKDTPKMETPKKPGPASKP 489
E K +TP+ ETP+K AS P
Sbjct: 585 PELEVKDETPEKETPEKDLKASSP 608
>SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 30.7 bits (66), Expect = 0.99
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +1
Query: 274 PELIAINTPNAQGRKAIQNVIHNIQQL-VKGVSASDPTEVASAPLPAKFEPPIEKK---- 438
P + + P A+ Q++ ++L + SA+D E + P P +PP E +
Sbjct: 276 PAQVPKDDPEAKAALLRQHIRPTGEKLSLNNTSATDDYEPVAEPAPNGNQPPTEPRTSTP 335
Query: 439 DTPKMETPKKPGPASKPWRPTLMP 510
TP TP + GP + T+ P
Sbjct: 336 GTPAKSTPTQSGPPLRRSTRTVKP 359
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 30.7 bits (66), Expect = 0.99
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 220 DATQTEKL*RENKSKPLPPELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASA 399
+AT T+KL ++ ++ + PE+ A+N + N + + + VKG+S S +A
Sbjct: 176 EATSTDKL-KQKSAEVIRPEIPAVNQEELAAANKVFNSLFSGSRGVKGIS-STVQIIADM 233
Query: 400 PLPAKFEPPIEKKDTP--KMETP 462
P P + + + P K+E P
Sbjct: 234 PAPWPTVSHVLQAEEPSWKLEEP 256
>SB_36051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 30.7 bits (66), Expect = 0.99
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +1
Query: 340 NIQQLVKGVSASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGP 477
N QQ K SAS EVA P PAK P ++D+P +P+ P
Sbjct: 58 NAQQ--KRKSASPKQEVARTPSPAKASP---RRDSPVQASPRNASP 98
>SB_37048| Best HMM Match : Phage_tube (HMM E-Value=7.3)
Length = 270
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 426 YREKRHSKDGDT*ETRASQQTVETHTHAITPENLARIAREPTASGGRWAPGVQHRA 593
YR + S G T RA + HTH + P+ L +R GRW Q A
Sbjct: 194 YRRYKASCKGYT--ARARSEDCGHHTHGVDPDTLLHCSRSEVFLFGRWLRDKQEAA 247
>SB_20156| Best HMM Match : GED (HMM E-Value=6.8e-16)
Length = 172
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +1
Query: 277 ELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAPLPAKFEPPIEKKDTPKME 456
+L+ + AQ R+ + + H+ ++ ++ V D T S P P PP++ D
Sbjct: 94 DLMEESEEEAQRREEMLKMYHSTKEALQIVGDID-THTISIPTP----PPVDNSDFDPRR 148
Query: 457 TPKKPGPASKPWRPTLMPLLRR 522
P P P P P P+ R
Sbjct: 149 PPAPPKPGGAPPIPGRPPIPSR 170
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 361 GVSASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPT 501
G +DPT A P P + +TP ++ GPA KP RP+
Sbjct: 10 GSKKNDPTSPAKKPPPRRRSRETPP-ETPPVQLKHLAGPAEKPHRPS 55
>SB_4516| Best HMM Match : rve (HMM E-Value=6.5)
Length = 262
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E S P P +PP E + TP TP + GP + T+ P
Sbjct: 201 LNNTSATDDYEPVSEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 256
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 232 TEKL*RENKSKPLPPELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASD--PTEVASAPL 405
TE+ + + KPL E + ++ A K ++ I ++ V+ V PTE + PL
Sbjct: 6173 TEREAKPLEEKPLIEEELRVSAEKAVEEKPLEKPIARKEKKVEEVKPKKEKPTEREAKPL 6232
Query: 406 PAKFEPPIEKKD-TPKMETPKKPGPASKP 489
K P +E+K+ T +E + P KP
Sbjct: 6233 KEK--PLVEEKELTVSVEKAVEEKPLEKP 6259
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 379 PTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRT 525
PT+ + PL + EP E+K TP+ P K P + RPT P + T
Sbjct: 222 PTKKPTKPLLPEVEPEEEEKATPR---PTKAKPTTIKRRPTERPTKKPT 267
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 379 PTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRT 525
PT+ + PL + EP E++ TP+ P K P + RPT P + T
Sbjct: 182 PTKKPTKPLLPEVEPEEEERATPR---PTKAKPTTMKRRPTERPTKKPT 227
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 379 PTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRT 525
PT+ + PL + EP E++ TP+ P K P + RPT P + T
Sbjct: 345 PTKKPTKPLLPEVEPEEEERATPR---PTKAKPTTIKRRPTERPTKKPT 390
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/109 (25%), Positives = 45/109 (41%)
Frame = +1
Query: 199 KNNHASPDATQTEKL*RENKSKPLPPELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASD 378
+N+ A Q+ K + N PLP + A P+ + ++ + + + V S+
Sbjct: 302 QNDEMRKLAAQSPK--KLNAPAPLPQGVFA-TLPSPKSASPPRHTLPRPEPIGGPVRGSE 358
Query: 379 PTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRT 525
P VA A P P TP+ E P G + + R +P RRT
Sbjct: 359 PKGVARADAPPV---PARTDQTPRPERPVPAGASPQSRRRRPVPTPRRT 404
>SB_37120| Best HMM Match : EB (HMM E-Value=4.2)
Length = 376
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 406 PAKFEPPIEKKDTPKMETPKKPGPASKP 489
P K P +KK PK KKP A KP
Sbjct: 298 PTKKPTPAKKKPAPKKPAAKKPAKAKKP 325
>SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 348
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 59 PSGLRPRGQRPTCAQSPPVSLLEYRKIPSLKGKS 160
PS +PRG++P ++PPV+ K P L+G +
Sbjct: 98 PSNAKPRGKKPASVKTPPVA---NEKGPDLQGNA 128
>SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)
Length = 534
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +3
Query: 186 QRVIQK*PCLPRCNPNRKALKRKQKQTFASGADSDKHSQRSREEGHTECDT*HSAAGEGC 365
+ +Q C+ P + + K + +GA D+ + RE T CD ++ C
Sbjct: 430 KETVQSSLCVSTLGPEKFKITSKMVHVYQTGAGYDEICTQRREISKTRCDLFQTSDKSLC 489
Query: 366 QCV 374
CV
Sbjct: 490 CCV 492
>SB_29642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 215 LNNTSATDDYEPVAEPAPNDNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 270
>SB_27280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 919 LNNTSATDDYEPVAEPAPNDNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 974
>SB_53641| Best HMM Match : rve (HMM E-Value=7.9e-14)
Length = 691
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 630 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 685
>SB_31102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/81 (29%), Positives = 31/81 (38%)
Frame = +1
Query: 253 NKSKPLPPELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAPLPAKFEPPIE 432
NK+ PL ++ NT Q IQ + + K A T + S P + P
Sbjct: 50 NKTLPLEVKVRLYNTALTQWLDWIQEAKESGKGRSKETDAQLRTPLPSPPSESP-STPFG 108
Query: 433 KKDTPKMETPKKPGPASKPWR 495
TP TPK P PWR
Sbjct: 109 ILPTPPTNTPKSRIPRPFPWR 129
>SB_25791| Best HMM Match : GASA (HMM E-Value=9.9)
Length = 234
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -3
Query: 382 WGPTH*HPSPAAE-CYVSHSVWPSSLERWECL 290
WG T P P C +S W SSL+ W L
Sbjct: 141 WGNTMRMPPPLGRLCIISTFTWTSSLQNWSTL 172
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 367 SASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRR 522
SA + A+AP K P+ ++ P + KKP A RP P L+R
Sbjct: 1419 SAKNRPSTAAAPEEPK---PVARQRGPTADNDKKPAKAQPVARPATAPALKR 1467
>SB_18792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 732 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 787
>SB_4506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 23 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 78
>SB_59489| Best HMM Match : RnaseH (HMM E-Value=0.0047)
Length = 567
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 506 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 561
>SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
Length = 1238
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 1177 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 1232
>SB_54350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 863 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 918
>SB_51440| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 38 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 93
>SB_16804| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)
Length = 921
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 860 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 915
>SB_4690| Best HMM Match : rve (HMM E-Value=1.5)
Length = 282
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 221 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 276
>SB_4584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGPASKPWRPTLMP 510
+ SA+D E + P P +PP E + TP TP + GP + T+ P
Sbjct: 54 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGPPLRRSTRTVKP 109
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = +1
Query: 394 SAPLPAKFEP--PIEKKDTPKMETPKKPGPASKPWR---PTLMPLLR 519
S+P P+K P + K D PK + P+KP P KP R TL L+R
Sbjct: 1427 SSPPPSKNGPLNSVRKVDDPKDDLPRKP-PPPKPRRSFTATLEDLMR 1472
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +1
Query: 376 DPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRT 525
D TEV + P ++ P+ E P P P S+ T + L+ R+
Sbjct: 232 DKTEVKGRTISVALSNPPTRRGPPRQEHPPPPPPGSRGRAKTQLQLIPRS 281
>SB_47661| Best HMM Match : zf-CCHC (HMM E-Value=0.015)
Length = 830
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 482 ANRGDPHSCHYSGELGADSPRTDGKWRSMGARC 580
A + D H C Y GE GA P D ++ G +C
Sbjct: 251 ARKKDRHKCDYCGETGAHKPGKD--CQAYGKQC 281
>SB_18896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 468 TRASQQTVETHTHAITPENLARIAREPTAS 557
T A+ QT + T A TP+N ++R P AS
Sbjct: 267 TAATLQTTQATTPATTPDNRQYLSRSPDAS 296
>SB_11755| Best HMM Match : GST_C (HMM E-Value=2.7e-05)
Length = 142
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 207 PCLPRCNPNRKALKRKQKQTFASG 278
P LPR +P+++AL R+ T ASG
Sbjct: 12 PLLPRGDPHKRALVRQISMTIASG 35
>SB_11561| Best HMM Match : HAT (HMM E-Value=1.1)
Length = 409
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +1
Query: 289 INTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAPLPAKFEPPIEKKDTPKMETPKK 468
I + N QG + + V + ++ V ++S+ + + P P+K P + K TPK+ TPK
Sbjct: 5 IYSNNNQGDRK-KGVSKDKEKQVANRNSSETRDQSVGPEPSKVTPKVTPKVTPKV-TPKV 62
Query: 469 PGPASKPWRPTLMP 510
+ P + P
Sbjct: 63 TPKVTPKVTPKVTP 76
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +1
Query: 256 KSKPLPPELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAPLPAKFEP--PI 429
+S+ L +A N G+K + H Q+ + + A P+P P P+
Sbjct: 667 RSEVLRERALAAKRRNTMGQKIVIEAPHTPPQIPTRTGSVNKPSRAPPPVPNHPSPAVPL 726
Query: 430 EKKDTPKMETPKKPGPASK 486
++ K P++P P ++
Sbjct: 727 RREGDTKSFAPQRPPPPTR 745
>SB_38092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 439 DTPKMETPKKPGPASKPW 492
D ETPK PGP SK W
Sbjct: 35 DHEHKETPKSPGPLSKRW 52
>SB_36310| Best HMM Match : DEAD (HMM E-Value=1.4)
Length = 1042
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +1
Query: 358 KGVSASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRP 498
KG P + LP F D+P+ P P P PW P
Sbjct: 984 KGTVVEVPLDAVLNRLPRHFPRAARPPDSPRDPPPITPPPPPVPWFP 1030
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 482 ANRGDPHSCHYSGELGADSPRTDGKWRSMGARC 580
A + D H C Y GE GA P D ++ G +C
Sbjct: 74 ARKKDRHKCDYCGETGAHKPGKD--CQAYGKQC 104
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/67 (31%), Positives = 27/67 (40%)
Frame = +1
Query: 289 INTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAPLPAKFEPPIEKKDTPKMETPKK 468
I +P AQ + A ++Q V G+S P P K P KK +PK PK
Sbjct: 4551 ITSPRAQNQPA-----EKLEQKVLGLSLDSSPPTKRPPPPVK--PKSIKKTSPKEVAPKP 4603
Query: 469 PGPASKP 489
G P
Sbjct: 4604 GGSPHAP 4610
>SB_42700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 379 PTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRP 498
P E + P AK EK D E+P +P PWRP
Sbjct: 26 PNERKARPFSAKARISTEKVDIQTAESPSRP-----PWRP 60
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 367 SASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKP 489
S + PT+ P P K TP T KP PA+ P
Sbjct: 60 SPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTP 100
>SB_19120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 423 SYREKRHSKDGDT*ETRASQQTVETHTHAITPEN 524
SYR K +T ET+++ +T ET + TPEN
Sbjct: 796 SYRLKFTQSTTETPETQSTTETPETQSTTETPEN 829
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 355 VKGVSASDPTEVASAPLPAKFEPPIEKK----DTPKMETPKKPGP 477
+ SA+D E + P P +PP E + TP TP + GP
Sbjct: 273 LNNTSATDDYEPVAEPAPNGNQPPTEPRTSTPGTPAKSTPTQSGP 317
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +1
Query: 274 PELIAINTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAP--LPAKFEPPIEKKDTP 447
P +A+ P+ + + N + G S + + +S P PA PP + T
Sbjct: 281 PATMALPLPDYGDAQTTNEIAANGE--TSGPSEPESSNKSSEPDSTPATNAPPSDSPSTT 338
Query: 448 KMETPKKPGPASKPWRPTLMP 510
TP+ P P + P L P
Sbjct: 339 TPTTPQPPTPTTPKTHPQLGP 359
>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
Length = 1572
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 373 SDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRP 498
S PT PLP F+P KK P+ + ++P RP
Sbjct: 1283 SSPTTQTPLPLPVAFQPKEVKKPEPQNLLEEHSDSPTEPPRP 1324
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 198 QK*PCLPRCNPNRKALKRKQKQTFASGADSDKHSQRSR 311
QK LPRC PNR+ KQ S + + + R R
Sbjct: 1412 QKAQTLPRCKPNRRRHTTKQPSESDSSDEDPRLTTRDR 1449
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 379 PTEVASAPL-PAKFEPPIEKKDTPKMETPKKPGPASKPWRPT 501
P+ ++ P+ P+ PI+ + TP KP P++ P +P+
Sbjct: 1268 PSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPS 1309
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 376 DPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRP 498
DP + A+ PA+ P +K T K +T K G + RP
Sbjct: 484 DPDQQAARKRPARTRPASGQKKTSKAKTSKPQGQDKQAARP 524
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/66 (22%), Positives = 26/66 (39%)
Frame = +1
Query: 292 NTPNAQGRKAIQNVIHNIQQLVKGVSASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKP 471
N+ Q A++ ++ ++ + + A+ P+ A P P P P P P
Sbjct: 329 NSVAIQKISALEEELNRLRLQIASLVANPPSTPAPTPAPLSSTPCAPFAPPPPPPPPPPP 388
Query: 472 GPASKP 489
P S P
Sbjct: 389 APGSTP 394
>SB_44929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 67 PTTTWPATHLRAESSGQSARV 129
P TWPAT L +S+G+S ++
Sbjct: 11 PNLTWPATDLDWQSAGRSRKI 31
>SB_19775| Best HMM Match : Arm (HMM E-Value=0.27)
Length = 607
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 449 RWRHLRNQG-QPANRGDPHSCHYSGELGA--DSPRTDGKWRSMGARCAASCKS 598
R R L NQ QP +R S + +L D P+ DG RS + SC S
Sbjct: 312 RGRDLGNQSSQPGSRASQLSHQLNRDLAEQRDQPKPDGFRRSQKSEATGSCAS 364
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 52 KAAFGPTTTW-PATHLRAESSGQSARVPEN 138
+ FGPTTT P L+ + S ARVPE+
Sbjct: 1090 EVTFGPTTTTQPQDPLKNQESDVKARVPED 1119
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 480 QQTVETHTHAITPENLARIAR 542
Q T ET TH + PE L+RI +
Sbjct: 653 QSTNETSTHVVLPEKLSRIKK 673
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = +1
Query: 250 ENKSKPLPPELIAI--NTPNAQGRKAIQNVIHNIQQLVKGVSAS-DPTEVASAPLPAKFE 420
++ + P+PP ++ TP A Q + + Q + ++A D T +AS +P
Sbjct: 818 KSSTPPVPPASLSTISTTPQPITTSAPQPITTSAAQPITTLAAGPDVTGMASPAVPG--- 874
Query: 421 PPIEKKDTPKMETPKKPGPASKPWRPTLMPLL 516
P D P + P PG P PLL
Sbjct: 875 PQAGLPDLPGLGEPHGPGNGQPPLEAFGQPLL 906
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -3
Query: 370 H*HPSPAAECYVSHSVWPSSLERWECLSLSAPEAKVCFCFL 248
H HPSP+ VSH + L + P K CF FL
Sbjct: 464 HSHPSPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFL 504
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 250 ENKSKPLPPELIAINTPNAQGRKAIQNVIHNI-QQLVKGVSASDPTEVASAPLPAKFEPP 426
+N S PL ++ N Q K +Q V + + ++++PT + P P P
Sbjct: 49 KNTSLPLDAKIRQYNRVLNQYLKWLQQVKDDGGTNRTRSSASAEPT--LNLPSPPSKTPS 106
Query: 427 IEKKDTPKMETPKKPGPASKPWRPTLMPLLRR 522
+TP P P + RP+ +P L+R
Sbjct: 107 SASSQAKVDKTPLLPSPPTNTPRPSRIPRLKR 138
>SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 532
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 455 RHLRNQGQPANRGDPHSC-HYSGELGADSPRTDGKWRSMG 571
RH+ G P C H G GAD PR+ G WR G
Sbjct: 365 RHVILTAAARTVGIPGGCGHPVG--GADGPRSSGVWREFG 402
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 379 PTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRP 498
P+EV + PA PP+ K TPK P + P P P
Sbjct: 740 PSEVTTKSPPA---PPLPPKVTPKPPAPPQFAPVPPPCAP 776
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,425,428
Number of Sequences: 59808
Number of extensions: 503326
Number of successful extensions: 1801
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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