Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0493.Seq
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   2.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   2.6  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   4.5  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   4.5  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   6.0  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.9  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   7.9  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 234 RKALKRKQKQTFASGADSDKHSQRSREEGHTECDT*HSAAGEGCQCV 374
           RK  + +++  FAS A+   +S  SR     EC+       E C CV
Sbjct: 338 RKVAQAQRQCVFASEANLSYYSVYSRNNCELECEA--KLILENCGCV 382


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 234 RKALKRKQKQTFASGADSDKHSQRSREEGHTECDT*HSAAGEGCQCV 374
           RK  + +++  FAS A+   +S  SR     EC+       E C CV
Sbjct: 338 RKVAQAQRQCVFASEANLSYYSVYSRNNCELECEA--KLILENCGCV 382



 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -1

Query: 327 LYGLPPLSVGSVYRYQ--LRRQRFAFVFSLELFCLGCIGGGMVIFGSLSASV 178
           L+ LP ++     R +  + R+R +F  +L  +CL     G+   G++S ++
Sbjct: 7   LHRLPHVAFDKEQRIKAAINRERVSFTENLREYCLNTTIHGLKYIGTVSLTL 58


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 219 RCNPNRKALKR-KQKQTFASGADSDKHSQRSREEGHTECDT*HSAAGEG 362
           + NPN ++    ++KQ  +S ADS  HS    E       +  SA  EG
Sbjct: 42  KANPNVQSTSALRKKQARSSNADS-SHSSEEEESAGLSYKSKRSAQPEG 89


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 219 RCNPNRKALKR-KQKQTFASGADSDKHSQRSREEGHTECDT*HSAAGEG 362
           + NPN ++    ++KQ  +S ADS  HS    E       +  SA  EG
Sbjct: 42  KANPNVQSTSALRKKQARSSNADS-SHSSEEEESAGLSYKSKRSAQPEG 89


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +1

Query: 370 ASDPTEVASAPLPAKFEPPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRT 525
           AS+P  +AS PLP            P   T    GPA K     + P+ RRT
Sbjct: 630 ASEPVPLASWPLP------------PPYITEPVEGPAKKEPESVVYPIYRRT 669


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/50 (26%), Positives = 19/50 (38%)
 Frame = +1

Query: 421 PPIEKKDTPKMETPKKPGPASKPWRPTLMPLLRRTWRG*PANRRQVAVDG 570
           PP         E  ++P     PW    +P LR      P N++   +DG
Sbjct: 454 PPFNWPSISSEEEQEQPADQQTPWTQVTIPELRLIASTMP-NKKAPGLDG 502


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
 Frame = +1

Query: 382 TEVASAPLPAKFEPP-IEKKDTPKMETPKKPGPASKPWRPTLMP 510
           T  A  P P    PP I  +  P    P +P P   P    + P
Sbjct: 151 TGPALFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRP 194


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 549 SVRGLSAPSSPE*WHECGSPRFAGWPWFLR 460
           SV G+  P  P  WH    P F G PW+LR
Sbjct: 85  SVPGIP-PFRPP-WHP--RPPFGGRPWWLR 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,810
Number of Sequences: 2352
Number of extensions: 16124
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)