Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0491.Seq
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    28   0.28 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    27   0.65 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    27   0.65 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   8.0  

>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -3

Query: 635 FDNKVRAGD**-FAGFHDNRVPGSDGSGHRQKQELQGIVPGAYSRTTPYGSLYITTSSRM 459
           FD  V   D   F G  D R P S   G+   +   G +      T PY ++ +T     
Sbjct: 616 FDENVNCNDAHSFCGLRDRRYPDSRSMGYPFDRFTPGTIGSLLDFTKPYVNMLVTPVKIR 675

Query: 458 FT 453
           FT
Sbjct: 676 FT 677


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +1

Query: 151 ETGILRHPNKRRCQLMRPSKKLETLSIAAQPGR*KAPSAAQEFVKNVRGKPKRHGGGPTQ 330
           ++G  RH  K++ Q  +  ++ +      QPG    P  AQ   +  + KP  H GG T 
Sbjct: 464 DSGTDRHSEKQQQQQSQHQQQHQH-----QPGG--GPLPAQSAKQRTKSKPAEHAGGSTT 516

Query: 331 GSE 339
           G +
Sbjct: 517 GDK 519


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +1

Query: 151 ETGILRHPNKRRCQLMRPSKKLETLSIAAQPGR*KAPSAAQEFVKNVRGKPKRHGGGPTQ 330
           ++G  RH  K++ Q  +  ++ +      QPG    P  AQ   +  + KP  H GG T 
Sbjct: 464 DSGTDRHSEKQQQQQSQHQQQHQH-----QPGG--GPLPAQSAKQRTKSKPAEHAGGSTT 516

Query: 331 GSE 339
           G +
Sbjct: 517 GDK 519


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 572 GSDGSGHRQKQELQGIVPGAYSRTTPY 492
           GS  SGH     L   VP  ++ ++PY
Sbjct: 46  GSASSGHSGSSSLYDRVPREHATSSPY 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,072
Number of Sequences: 2352
Number of extensions: 16749
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)