Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0489.Seq
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   1.1  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         25   3.4  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         25   3.4  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         25   3.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.0  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    24   6.0  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 297  PSPVTFAMRGLPSAKRSARIFRRQNG*SVGCHLQRHTNERLTDDTLP 157
            P P+    RGLP + R+ R    +       +LQR   +R  + TLP
Sbjct: 1116 PPPIPMRRRGLPPSPRTVRARHERR-----LYLQRLYRQRAREGTLP 1157


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 2  HSSHHHRQRR 31
          HS HHHR+RR
Sbjct: 30 HSRHHHRRRR 39


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 2  HSSHHHRQRR 31
          HS HHHR+RR
Sbjct: 30 HSRHHHRRRR 39


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 2  HSSHHHRQRR 31
          HS HHHR+RR
Sbjct: 30 HSRHHHRRRR 39


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 446  TEVSGCWSCIHEIYESVINRIVLSSRTPTTSP 541
            T+ +G +   H++  S +  ++LS  TP+  P
Sbjct: 2315 TDENGTYGEAHKVQSSCLFNLLLSLETPSPDP 2346


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 331 ALRVAGNDFRNPFARHLRNARVTFSQKIST 242
           A  +  N  RNP +  L+     F QK+ST
Sbjct: 189 AFGIECNTLRNPDSDFLKYGNKVFEQKVST 218


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,839
Number of Sequences: 2352
Number of extensions: 20192
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)