Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0489.Seq
(771 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094917-1|AAM11270.1| 631|Drosophila melanogaster RH28890p pro... 43 5e-04
AE013599-1984|AAF58181.1| 631|Drosophila melanogaster CG10253-P... 43 5e-04
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 30 4.0
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 30 4.0
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 30 4.0
AY113481-1|AAM29486.1| 253|Drosophila melanogaster RE45066p pro... 29 7.1
AE013599-3521|AAF46938.1| 253|Drosophila melanogaster CG9896-PA... 29 7.1
J03177-1|AAA28535.1| 510|Drosophila melanogaster protein ( D.me... 29 9.3
BT023936-1|ABB36440.1| 510|Drosophila melanogaster RE06859p pro... 29 9.3
BT010029-1|AAQ22498.1| 426|Drosophila melanogaster RE03865p pro... 29 9.3
AE014297-4241|AAF56798.1| 510|Drosophila melanogaster CG10002-P... 29 9.3
>AY094917-1|AAM11270.1| 631|Drosophila melanogaster RH28890p
protein.
Length = 631
Score = 42.7 bits (96), Expect = 5e-04
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 559 SHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRV 738
+ +Y G +YF + + D E+ + +E + GGS+ HHHG+GK R
Sbjct: 519 TQTYDAGACIYFYFGFRSTDVADPVEL---FEAIEHSARDEILSCGGSLSHHHGVGKIRS 575
Query: 739 HW 744
HW
Sbjct: 576 HW 577
Score = 36.7 bits (81), Expect = 0.035
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 9 HIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARL 188
H+I+G+EG L ITEV +K+ + P + + + G +RE+ +P+ RL
Sbjct: 315 HVILGSEGTLGVITEVVLKV-RPLPSLRRYGSLAFPNFEQGVLFMREVARRRCQPASVRL 373
Query: 189 YDAE 200
D E
Sbjct: 374 MDNE 377
>AE013599-1984|AAF58181.1| 631|Drosophila melanogaster CG10253-PA
protein.
Length = 631
Score = 42.7 bits (96), Expect = 5e-04
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 559 SHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRV 738
+ +Y G +YF + + D E+ + +E + GGS+ HHHG+GK R
Sbjct: 519 TQTYDAGACIYFYFGFRSTDVADPVEL---FEAIEHSARDEILSCGGSLSHHHGVGKIRS 575
Query: 739 HW 744
HW
Sbjct: 576 HW 577
Score = 36.7 bits (81), Expect = 0.035
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 9 HIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARL 188
H+I+G+EG L ITEV +K+ + P + + + G +RE+ +P+ RL
Sbjct: 315 HVILGSEGTLGVITEVVLKV-RPLPSLRRYGSLAFPNFEQGVLFMREVARRRCQPASVRL 373
Query: 189 YDAE 200
D E
Sbjct: 374 MDNE 377
>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
protein protein.
Length = 3579
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 652 CGTCRFPLPAYSQRRCNRRRSTCWCRSDSYE 560
CG CR L CN+ C+C+++ Y+
Sbjct: 2055 CGPCRCDLAQGYHPDCNKTTGQCYCKTNHYQ 2085
>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
protein.
Length = 3574
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 652 CGTCRFPLPAYSQRRCNRRRSTCWCRSDSYE 560
CG CR L CN+ C+C+++ Y+
Sbjct: 2055 CGPCRCDLAQGYHPDCNKTTGQCYCKTNHYQ 2085
>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
Length = 3575
Score = 29.9 bits (64), Expect = 4.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 652 CGTCRFPLPAYSQRRCNRRRSTCWCRSDSYE 560
CG CR L CN+ C+C+++ Y+
Sbjct: 2056 CGPCRCDLAQGYHPDCNKTTGQCYCKTNHYQ 2086
>AY113481-1|AAM29486.1| 253|Drosophila melanogaster RE45066p
protein.
Length = 253
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 637 IDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKL 753
+DKY N L KI CE+ R G G G R S L
Sbjct: 197 VDKYANSLTKIYCEDFTRNPGICRDGEGNGSTRAAGSSL 235
>AE013599-3521|AAF46938.1| 253|Drosophila melanogaster CG9896-PA
protein.
Length = 253
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 637 IDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKL 753
+DKY N L KI CE+ R G G G R S L
Sbjct: 197 VDKYANSLTKIYCEDFTRNPGICRDGEGNGSTRAAGSSL 235
>J03177-1|AAA28535.1| 510|Drosophila melanogaster protein (
D.melanogaster forkhead protein (fkh) gene, complete
cds. ).
Length = 510
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 332 GIAGSGQRFPQSLRPSPSQCEGYLQPKDQHAFSVGKMGEVLGAIFSV 192
G G G P + P+P+ G + P + A+++ MG +G + SV
Sbjct: 35 GGGGGGPPPPSNNNPNPTSNGGSMSPLARSAYTMNSMGLPVGGMSSV 81
>BT023936-1|ABB36440.1| 510|Drosophila melanogaster RE06859p
protein.
Length = 510
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 332 GIAGSGQRFPQSLRPSPSQCEGYLQPKDQHAFSVGKMGEVLGAIFSV 192
G G G P + P+P+ G + P + A+++ MG +G + SV
Sbjct: 35 GGGGGGPPPPSNNNPNPTSNGGSMSPLARSAYTMNSMGLPVGGMSSV 81
>BT010029-1|AAQ22498.1| 426|Drosophila melanogaster RE03865p
protein.
Length = 426
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 332 GIAGSGQRFPQSLRPSPSQCEGYLQPKDQHAFSVGKMGEVLGAIFSV 192
G G G P + P+P+ G + P + A+++ MG +G + SV
Sbjct: 35 GGGGGGPPPPSNNNPNPTSNGGSMSPLARSAYTMNSMGLPVGGMSSV 81
>AE014297-4241|AAF56798.1| 510|Drosophila melanogaster CG10002-PA
protein.
Length = 510
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 332 GIAGSGQRFPQSLRPSPSQCEGYLQPKDQHAFSVGKMGEVLGAIFSV 192
G G G P + P+P+ G + P + A+++ MG +G + SV
Sbjct: 35 GGGGGGPPPPSNNNPNPTSNGGSMSPLARSAYTMNSMGLPVGGMSSV 81
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,951,407
Number of Sequences: 53049
Number of extensions: 893678
Number of successful extensions: 2547
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2543
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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