Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0488.Seq
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 130 8e-31
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical p... 31 1.2
AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical ... 30 1.6
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 30 2.1
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 4.7
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 29 4.7
Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical p... 28 6.3
Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z50016-13|CAO82071.1| 211|Caenorhabditis elegans Hypothetical p... 28 6.3
Z50016-12|CAA90317.3| 192|Caenorhabditis elegans Hypothetical p... 28 6.3
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st... 28 6.3
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 28 8.3
AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 130 bits (315), Expect = 8e-31
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = +1
Query: 511 WVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYNALVLSTESSVVLYGKLEAVPEGK 690
WVHRLRRQGKSL FL LRDG G+LQCVL+ LCQ+Y+A+ LSTE+SV +YG ++A+P+GK
Sbjct: 129 WVHRLRRQGKSLMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTETSVQVYGIIKALPDGK 188
Query: 691 KAPGGHELTADYWELIGLAPPG 756
AP GHELT DYWE+IG AP G
Sbjct: 189 SAPDGHELTVDYWEVIGKAPAG 210
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 DDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQN-LDEAKKILLQEDPS 439
++ + ++ AAK+ +KK K + E K ++KA E+ E+ L+EAKKI D S
Sbjct: 46 EEGESWEPAAKAAIKKAVKKYEAE-VKKLEKAGCREKEAEEAQHAALEEAKKITFSLDKS 104
Query: 440 LPKATVVKICETTEHRGQRICIR 508
LP+A V+KI E+ +HR QR+ I+
Sbjct: 105 LPEAKVIKIGESVQHRDQRVSIK 127
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 94 STCRTLETLACPRYIPRIRMAMTIQVMVRKRNH 192
S CR +E +ACPR P+I M+ T + V R H
Sbjct: 404 SNCRKVEVIACPR-DPKIEMSRTRWITVGPRGH 435
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 YSAFYM-VYYVRPTML*SYLRSHLWSCM 661
YS+F + +YY PT L SY+ + WSC+
Sbjct: 637 YSSFQLFMYYAVPTTLLSYIFAFFWSCL 664
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 YSAFYM-VYYVRPTML*SYLRSHLWSCM 661
YS+F + +YY PT L SY+ + WSC+
Sbjct: 637 YSSFQLFMYYAVPTTLLSYIFAFFWSCL 664
>Z93381-5|CAB07608.2| 720|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 720
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 YSAFYM-VYYVRPTML*SYLRSHLWSCM 661
YS F + +YY PT L SY+ + WSC+
Sbjct: 629 YSTFQLFMYYAVPTTLLSYIFAFFWSCL 656
>U40797-14|AAB37544.2| 200|Caenorhabditis elegans Hypothetical
protein C28C12.1 protein.
Length = 200
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 359 KAEEENTEKRSQNLDEAKKILLQEDPSL 442
K +EE TEK+ + E++K +L+ED +L
Sbjct: 160 KTDEEGTEKKEPTMTESRKEMLREDDTL 187
>AC024841-3|AAK68542.1| 185|Caenorhabditis elegans Hypothetical
protein Y59H11AM.4 protein.
Length = 185
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 260 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPS 439
K++ KD + ++ KKI + E DK EE EK+ L ++KK L+ED +
Sbjct: 123 KNEEKDAEAPVENDDKKISE----EGINKTDKT--EEPELEKKKSELSDSKKERLREDDT 176
Query: 440 L 442
L
Sbjct: 177 L 177
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 260 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPS 439
K++ KD D K + KK +K ++ K +K K EE+ EK+ + ++ KK+ + P
Sbjct: 166 KEEKKD-DKEEKKEEKKEEKKEEKKEEKKEEK-KEEEKKEEKKEEKKEDEKKV--EPKPG 221
Query: 440 LPK 448
PK
Sbjct: 222 EPK 224
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 260 KDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKA-KAEEENTEKRSQNLDEAKKILLQED 433
K D KD K + KK K +E K K K EE+ EK+ + E KK +ED
Sbjct: 154 KSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKED 212
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 581 YSAFYM-VYYVRPTML*SYLRSHLWSCM 661
YS+F + +YY PT + SY+ + WSC+
Sbjct: 622 YSSFQIFMYYAVPTTVLSYIFAFFWSCL 649
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 329 RENYKAMDKAKAEEENTEKRSQNLDEAKKI 418
+EN K D+ + ++ ++KRSQNLDE + +
Sbjct: 852 QENTKLRDELQEMQKMSKKRSQNLDELENM 881
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +1
Query: 586 CVLHGLLCQTYNALVLSTESSVVLYGKLEAVPEGKKAPGGHELTADYWELIGLAPP 753
CV G C + + SS + K+ +GK A G H L AD EL PP
Sbjct: 12 CVFFGFSCLSIFFSGVFDSSSSIACQKVVVARQGKMADGEHTLPADE-ELFEQPPP 66
>Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.13 protein.
Length = 249
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -2
Query: 718 LSAHDHPEPSFPRAQPLIFHTRPQMTP*IGLEHCRSDIVNHVERTVGTQCHHAGSGMPEI 539
++A +P P + +PL +T TP ++ ++ + RT G C +G P +
Sbjct: 60 VAADGYPSPGRDQQRPLACYTTATATPAAVVQDMKNAAQSTCPRTCGLCCQTSGYNCPNV 119
>Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.10 protein.
Length = 249
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -2
Query: 718 LSAHDHPEPSFPRAQPLIFHTRPQMTP*IGLEHCRSDIVNHVERTVGTQCHHAGSGMPEI 539
++A +P P + +PL +T TP ++ ++ + RT G C +G P +
Sbjct: 60 VAADGYPSPGRDQQRPLACYTTATATPAAVVQDMKNAAQSTCPRTCGLCCQTSGYNCPNV 119
>Z50016-13|CAO82071.1| 211|Caenorhabditis elegans Hypothetical
protein T21C12.4b protein.
Length = 211
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 472
KS K I K R + ++ ++ EK+ ++ E K + +D +P K E
Sbjct: 141 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 200
Query: 473 TTEHRGQRIC 502
+++RG ++C
Sbjct: 201 NSKNRG-KVC 209
>Z50016-12|CAA90317.3| 192|Caenorhabditis elegans Hypothetical
protein T21C12.4a protein.
Length = 192
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 472
KS K I K R + ++ ++ EK+ ++ E K + +D +P K E
Sbjct: 122 KSNKKSISKKSDRSKVSKVKRSPKTDKELEKKPSSIYERKDVDGHDDLKVPNMRSRKHSE 181
Query: 473 TTEHRGQRIC 502
+++RG ++C
Sbjct: 182 NSKNRG-KVC 190
>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 1 protein.
Length = 1616
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICE 472
K+ K ++ + E Y + E+ENT K+ +N KK L E + K +IC
Sbjct: 1489 KNYRKYDERKYESEEYSFEETYDYEQENTNKKQKNQRSQKKSDLVEKTQI-KEFSHRICF 1547
Query: 473 TTEHRGQRICIRDGY 517
+ E + C R GY
Sbjct: 1548 SVEPVAE--CRRRGY 1560
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 463
++ ++IQ+I RE+ + +AK E +EKR + ++ +K++ D S KAT +
Sbjct: 12 ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68
Query: 464 ICE 472
CE
Sbjct: 69 KCE 71
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +2
Query: 293 KSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNL---DEAKKILLQEDPSLPKATVVK 463
++ ++IQ+I RE+ + +AK E +EKR + ++ +K++ D S KAT +
Sbjct: 12 ENNTQRIQEI--RESIRVKTRAKKVSETSEKRRERFRAREDVQKLIRGAD-SYTKATYEE 68
Query: 464 ICE 472
CE
Sbjct: 69 KCE 71
>AF063007-1|AAC16430.2| 730|Caenorhabditis elegans Hypothetical
protein R119.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 377 TEKRSQNLDEAKKILLQEDPSLPKATVVKICETTE 481
T +NLD QED LP+ K+C+ TE
Sbjct: 648 TSVGEENLDPMDYCTCQEDEILPEDPCFKVCDITE 682
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,253,489
Number of Sequences: 27780
Number of extensions: 371943
Number of successful extensions: 1110
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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