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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0487.Seq
         (582 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...   166   2e-42
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...   165   3e-42
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...   165   3e-42
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...    95   7e-21
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...    91   1e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    68   1e-12
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    48   8e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    44   2e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    35   0.008
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    32   0.053
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    31   0.12 
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    30   0.21 
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||...    30   0.28 
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    29   0.37 
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    28   0.87 
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    28   1.1  
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c...    28   1.1  
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    28   1.1  
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    27   1.5  
SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa...    26   3.5  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    26   4.6  
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    26   4.6  
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb...    25   6.1  

>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score =  166 bits (403), Expect = 2e-42
 Identities = 76/85 (89%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
           EA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMIT
Sbjct: 45  EATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMIT 104

Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
           GTSQADCAVLI+  GTGEFEAGIS+
Sbjct: 105 GTSQADCAVLIIGGGTGEFEAGISK 129



 Score =  128 bits (309), Expect = 6e-31
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = +1

Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
           +GQTREHALLA+TLGVKQLIV VNKMD+T   +S+ RFEEI KE S++IKK+G+NP  V 
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVP 187

Query: 436 FVPISGWHGDNMLEPSTKMPWFKGCRWSVK 525
           FVP+SG+ GDNM+EP+T MPW++G +   K
Sbjct: 188 FVPVSGFQGDNMIEPTTNMPWYQGWQKETK 217


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score =  165 bits (402), Expect = 3e-42
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
           EA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMIT
Sbjct: 45  EATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMIT 104

Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
           GTSQADCA+LI+  GTGEFEAGIS+
Sbjct: 105 GTSQADCAILIIGGGTGEFEAGISK 129



 Score =  128 bits (309), Expect = 6e-31
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = +1

Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
           +GQTREHALLA+TLGVKQLIV VNKMD+T   +S+ RFEEI KE S++IKK+G+NP  V 
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVP 187

Query: 436 FVPISGWHGDNMLEPSTKMPWFKGCRWSVK 525
           FVP+SG+ GDNM+EP+T MPW++G +   K
Sbjct: 188 FVPVSGFQGDNMIEPTTNMPWYQGWQKETK 217


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  165 bits (402), Expect = 3e-42
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = +2

Query: 2   EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
           EA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY VT+IDAPGHRDFIKNMIT
Sbjct: 45  EATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMIT 104

Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
           GTSQADCA+LI+  GTGEFEAGIS+
Sbjct: 105 GTSQADCAILIIGGGTGEFEAGISK 129



 Score =  128 bits (309), Expect = 6e-31
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = +1

Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
           +GQTREHALLA+TLGVKQLIV VNKMD+T   +S+ RFEEI KE S++IKK+G+NP  V 
Sbjct: 130 DGQTREHALLAYTLGVKQLIVAVNKMDTTG--WSQARFEEIVKETSNFIKKVGFNPKTVP 187

Query: 436 FVPISGWHGDNMLEPSTKMPWFKGCRWSVK 525
           FVP+SG+ GDNM+EP+T MPW++G +   K
Sbjct: 188 FVPVSGFQGDNMIEPTTNMPWYQGWQKETK 217


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 95.1 bits (226), Expect = 7e-21
 Identities = 45/82 (54%), Positives = 53/82 (64%)
 Frame = +2

Query: 2   EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
           EA   GKGSF YAW+LD  + ER RG+T+D+A   FE+ K    I DAPGHRDFI  MI 
Sbjct: 215 EAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIA 274

Query: 182 GTSQADCAVLIVAAGTGEFEAG 247
           G S AD AVL+V +    FE G
Sbjct: 275 GASSADFAVLVVDSSQNNFERG 296



 Score = 76.2 bits (179), Expect = 3e-15
 Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = +1

Query: 247 YL*NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY-IKKIGYNP 423
           +L NGQTREHA L   LG+ +++V VNK+D     +SE RF+EIK  VS + IK +G+  
Sbjct: 297 FLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKT 354

Query: 424 AAVAFVPISGWHGDNML--EPSTKMPWFKG 507
           + V FVPIS   G N++  + S    W+KG
Sbjct: 355 SNVHFVPISAISGTNLIQKDSSDLYKWYKG 384


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 90.6 bits (215), Expect = 1e-19
 Identities = 40/85 (47%), Positives = 56/85 (65%)
 Frame = +2

Query: 2   EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
           EA+E GK S+  +W LD    ERE+G T+++    FET     +++DAPGH+ ++ NMI 
Sbjct: 276 EAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMIN 335

Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
           G SQAD  VL+++A  GEFEAG  R
Sbjct: 336 GASQADIGVLVISARRGEFEAGFER 360



 Score = 71.3 bits (167), Expect = 9e-14
 Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
 Frame = +1

Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI-GYNPAA-V 432
           GQTREHA+LA T G+  L+V +NKMD     +SE R++E   ++S +++++ GYN    V
Sbjct: 362 GQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDV 421

Query: 433 AFVPISGWHGDNMLE--PSTKMPWFKG 507
            ++P+S + G N+ +   S+  PW++G
Sbjct: 422 KYMPVSAYTGQNVKDRVDSSVCPWYQG 448


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 67.7 bits (158), Expect = 1e-12
 Identities = 31/75 (41%), Positives = 48/75 (64%)
 Frame = +2

Query: 11  EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 190
           ++G+ SF     +DK   E+ RGITI  A  ++ET+  +   +D PGH D+IKNMITG +
Sbjct: 79  DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138

Query: 191 QADCAVLIVAAGTGE 235
             D A+++V+A  G+
Sbjct: 139 TMDGAIIVVSATDGQ 153



 Score = 45.2 bits (102), Expect = 7e-06
 Identities = 22/46 (47%), Positives = 31/46 (67%)
 Frame = +1

Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 399
           QTREH LLA  +GVKQ++V +NK+D  EP   E    E+++ +S Y
Sbjct: 156 QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 48.4 bits (110), Expect = 8e-07
 Identities = 25/63 (39%), Positives = 33/63 (52%)
 Frame = +2

Query: 44  VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
           V+D L AER+RGITI+ A   F      + +ID PGH DF   +    +  D AV I+  
Sbjct: 67  VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126

Query: 224 GTG 232
             G
Sbjct: 127 SAG 129


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +2

Query: 47  LDKLKAERERGITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 214
           LDKL+ ER RGIT+       ++ +    Y + +ID PGH DF   ++   +  +  +L+
Sbjct: 95  LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154

Query: 215 VAAGTG 232
           V A  G
Sbjct: 155 VDASQG 160


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 35.1 bits (77), Expect = 0.008
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 17  GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 190
           GK +   A+    + +    GIT  I  +   F+    ++T +D PGH  F      G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242

Query: 191 QADCAVLIVAAGTG 232
            AD  VL+VA   G
Sbjct: 243 IADIVVLVVAGDDG 256


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 32.3 bits (70), Expect = 0.053
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 19/81 (23%)
 Frame = +2

Query: 47  LDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDFIK 169
           +D ++ ERE+GITI  A     W+               FE S Y + IID PGH DF  
Sbjct: 102 MDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDFTI 160

Query: 170 NMITGTSQADCAVLIVAAGTG 232
            +       D AVL++ A +G
Sbjct: 161 EVERALRVLDGAVLVLCAVSG 181


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 31.1 bits (67), Expect = 0.12
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 125 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 220
           +V+ +D PGH   +  M+ G +  D A+L++A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140



 Score = 25.0 bits (52), Expect = 8.1
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +1

Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 402
           QT EH      + +K +I+  NK+D      +E  ++ I K +   +
Sbjct: 149 QTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTV 195


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 30.3 bits (65), Expect = 0.21
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 122 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 232
           Y + +ID+PGH DF   + + +   D A ++V A  G
Sbjct: 94  YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130


>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 380

 Score = 29.9 bits (64), Expect = 0.28
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +2

Query: 50  DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 172
           +K++A+  E+ + I+I   + E   +++  T+ID PG  DFI N
Sbjct: 60  EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 29.5 bits (63), Expect = 0.37
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 134 IIDAPGHRDFIKNMITGTSQADCAVLIV 217
           IID PGH  F      GTS  + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 28.3 bits (60), Expect = 0.87
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +1

Query: 382 KEVS---SYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGCRWSVKKAKL 537
           KEVS   SYI     +P        +G+  +N+++P +  P FKG  ++   AKL
Sbjct: 159 KEVSTSKSYISSGYLHPKTSPIFKKNGYATENVVDPISSSPRFKGPNYNKFNAKL 213


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 122 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 367

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query: 353 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDAG 514
           + +PD+     ++PHT +R +T + L    LSC +   +E +     P   G +D G
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNG 201


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 122 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 27.5 bits (58), Expect = 1.5
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +2

Query: 65  ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
           ERER ++I      +A+   +   +    ID PGH DF+  +    + +D  VL+V
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240


>SPACUNK4.17 |||NAD binding dehydrogenase family
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 405

 Score = 26.2 bits (55), Expect = 3.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 432 RFRAHFWMARRQHVGAFNQNALVQGMQVER-KEGKADG 542
           RF A  W  +   VGAF  N  +QG + +   E +ADG
Sbjct: 292 RFTAASWKYKDGGVGAFTHNITLQGAKYDTCIEVQADG 329


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
           EF hand and WH2 motif |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1794

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 318 YDELFDTEGESEQGMLTGLTVLEI 247
           YD++FD   +  +G L G  VLEI
Sbjct: 825 YDQIFDAWDKERKGTLGGNAVLEI 848


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 25.8 bits (54), Expect = 4.6
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 111 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWAS 1
           S F   IS+ +P     FSL+ ++   K  LPI W S
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCS 439


>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 347

 Score = 25.4 bits (53), Expect = 6.1
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 331 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 501
           +D  +P   +  F  IKK+V  Y+ ++ + P        +   G N LEP TK PW+
Sbjct: 107 LDLKKPLLPQILFGNIKKDV--YLDQV-HRPRHYRGSGSAPLFG-NFLEPLTKTPWY 159


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,582,037
Number of Sequences: 5004
Number of extensions: 53583
Number of successful extensions: 189
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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