Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0487.Seq
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 181 3e-46
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 1e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 1e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 154 4e-38
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 4e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 4e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 93 1e-19
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 3e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 4e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 4e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 4e-11
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 47 8e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.001
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.20
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.20
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.79
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.0
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.4
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.4
U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion defec... 29 1.8
U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion defec... 29 1.8
U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion defec... 29 1.8
U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion defec... 29 1.8
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.8
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.8
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.8
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.8
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 5.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 181 bits (441), Expect = 3e-46
Identities = 102/169 (60%), Positives = 110/169 (65%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMIT
Sbjct: 45 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISRTVKXXXXXXXXXXXXXXXXXXE*TKWIPLNHHTVS 361
GTSQADCAVL+VA GTGEFEAGIS+ + + + L T S
Sbjct: 105 GTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV-------KQLVSLRSPTRS 157
Query: 362 PDLRKSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRD 508
PD +SRR T Q L D TETTC C GSRD
Sbjct: 158 PD----------SSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRD 196
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/43 (55%), Positives = 28/43 (65%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 384
NGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 130 NGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (427), Expect = 1e-44
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMIT
Sbjct: 45 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
GTSQADCAVL+VA GTGEFEAGIS+
Sbjct: 105 GTSQADCAVLVVACGTGEFEAGISK 129
Score = 145 bits (352), Expect = 2e-35
Identities = 69/91 (75%), Positives = 77/91 (84%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
NGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 436 FVPISGWHGDNMLEPSTKMPWFKGCRWSVKK 528
FVPISG++GDNMLE S+ MPWFKG W+V++
Sbjct: 190 FVPISGFNGDNMLEVSSNMPWFKG--WAVER 218
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 501 QGMQVERKEGKADGKCLIEALDAILPP 581
+G VERKEG A GK L+EALD+I+PP
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSIIPP 238
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (427), Expect = 1e-44
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMIT
Sbjct: 45 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
GTSQADCAVL+VA GTGEFEAGIS+
Sbjct: 105 GTSQADCAVLVVACGTGEFEAGISK 129
Score = 145 bits (352), Expect = 2e-35
Identities = 69/91 (75%), Positives = 77/91 (84%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
NGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV
Sbjct: 130 NGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVP 189
Query: 436 FVPISGWHGDNMLEPSTKMPWFKGCRWSVKK 528
FVPISG++GDNMLE S+ MPWFKG W+V++
Sbjct: 190 FVPISGFNGDNMLEVSSNMPWFKG--WAVER 218
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 501 QGMQVERKEGKADGKCLIEALDAILPP 581
+G VERKEG A GK L+EALD+I+PP
Sbjct: 212 KGWAVERKEGNASGKTLLEALDSIIPP 238
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 154 bits (374), Expect = 4e-38
Identities = 70/73 (95%), Positives = 73/73 (100%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMIT
Sbjct: 45 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVA 220
GTSQADCAVL+VA
Sbjct: 105 GTSQADCAVLVVA 117
Score = 112 bits (269), Expect = 2e-25
Identities = 51/73 (69%), Positives = 60/73 (82%)
Frame = +1
Query: 310 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 489
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 490 MPWFKGCRWSVKK 528
MPWFKG W+V++
Sbjct: 174 MPWFKG--WAVER 184
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +3
Query: 501 QGMQVERKEGKADGKCLIEALDAILPP 581
+G VERKEG A GK L+EALD+I+PP
Sbjct: 178 KGWAVERKEGNASGKTLLEALDSIIPP 204
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (275), Expect = 4e-26
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMIT
Sbjct: 208 EAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMIT 267
Query: 182 GTSQADCAVLIVAAGTGEFEAG 247
GTSQAD A+L+V A TGEFE G
Sbjct: 268 GTSQADAAILVVNATTGEFETG 289
Score = 70.9 bits (166), Expect = 6e-13
Identities = 36/84 (42%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVA 435
GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 294 GQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--K 349
Query: 436 FVPISGWHGDNMLEPSTKMPWFKG 507
FVP+SG+ G+N+++ ++ W+ G
Sbjct: 350 FVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (275), Expect = 4e-26
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI NMIT
Sbjct: 226 EAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMIT 285
Query: 182 GTSQADCAVLIVAAGTGEFEAG 247
GTSQAD A+L+V A TGEFE G
Sbjct: 286 GTSQADAAILVVNATTGEFETG 307
Score = 70.9 bits (166), Expect = 6e-13
Identities = 36/84 (42%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVA 435
GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++
Sbjct: 312 GQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--K 367
Query: 436 FVPISGWHGDNMLEPSTKMPWFKG 507
FVP+SG+ G+N+++ ++ W+ G
Sbjct: 368 FVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/85 (48%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI
Sbjct: 147 EAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIV 206
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
G +QAD AVL+++A GEFE G R
Sbjct: 207 GANQADLAVLVISARRGEFETGFDR 231
Score = 70.5 bits (165), Expect = 8e-13
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VA 435
GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+NP +
Sbjct: 233 GQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDIT 292
Query: 436 FVPISGWHGDNMLEPST--KMPWFKG 507
+VP SG G + + T + W+ G
Sbjct: 293 YVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 227 TGEFE 241
G E
Sbjct: 143 DGVME 147
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 441
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 3e-12
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 227 TGEFE 241
G E
Sbjct: 143 DGVME 147
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 441
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 227 TG 232
G
Sbjct: 147 DG 148
Score = 33.9 bits (74), Expect = 0.085
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 262 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 417
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 227 TG 232
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.085
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 262 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 417
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 227 TG 232
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.085
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 262 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 417
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 44 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 224 GTG 232
G
Sbjct: 136 NQG 138
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 47.2 bits (107), Expect = 8e-06
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAER 70
EAQEMGKGSFKYAWVLDKLK +
Sbjct: 45 EAQEMGKGSFKYAWVLDKLKVTK 67
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 44 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 224 GTG 232
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 227 TG 232
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 17 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 193
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 194 ADCAVLIVAAGTG 232
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 50 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 214
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 215 VAAGTG 232
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 50 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 214
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 215 VAAGTG 232
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.79
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 125 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 220
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 83 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 232
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 83 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 232
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 134 IIDAPGHRDFIKNMITGTSQADCAVLIV 217
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>U80022-4|AAC25887.2| 469|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform a protein.
Length = 469
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 393 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGMQVERKEGKAD 539
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 108 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 156
>U80022-3|AAV28354.1| 490|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform b protein.
Length = 490
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 393 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGMQVERKEGKAD 539
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 129 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 177
>U80022-2|AAV28355.1| 510|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform c protein.
Length = 510
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 393 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGMQVERKEGKAD 539
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 149 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 197
>U80022-1|AAV28356.1| 501|Caenorhabditis elegans Expulsion
defective (defecation)protein 2, isoform d protein.
Length = 501
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 393 LIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGMQVERKEGKAD 539
++H+ + P+ FW QHVG+ + + Q + E++E K D
Sbjct: 140 VVHRPSEICPASFLSELDFWRISHQHVGSCCADIIPQKREEEKEEEKVD 188
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 392 PHTSRRLATTQLLSLSCPFLD 454
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 392 PHTSRRLATTQLLSLSCPFLD 454
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 392 PHTSRRLATTQLLSLSCPFLD 454
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 392 PHTSRRLATTQLLSLSCPFLD 454
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVA 435
QT EH LLA ++I+ +NK D E + + E K+V +K +G N V
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVE 167
Query: 436 FVPISGWHGDNMLE 477
G+ + ML+
Sbjct: 168 MSLADGYFKEEMLQ 181
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 128 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 232
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 128 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 223
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,385,254
Number of Sequences: 27780
Number of extensions: 302674
Number of successful extensions: 928
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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