Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0487.Seq
(582 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 157 4e-39
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 157 4e-39
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 157 4e-39
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 157 4e-39
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 103 9e-23
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 82 3e-16
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 4e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 4e-11
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 1e-04
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 43 2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 7e-04
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.004
At5g13650.2 68418.m01585 elongation factor family protein contai... 36 0.015
At5g13650.1 68418.m01584 elongation factor family protein contai... 36 0.015
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.020
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.020
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.026
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.18
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.24
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.24
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.32
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.32
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 0.74
At2g37010.1 68415.m04539 ABC transporter family protein contains... 30 1.3
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.3
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.3
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.3
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.7
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.7
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 29 2.3
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.3
At3g07180.2 68416.m00856 GPI transamidase component PIG-S-relate... 29 3.0
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 4.0
At2g38820.2 68415.m04769 expressed protein contains Pfam profile... 28 4.0
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 28 4.0
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 5.2
At1g17310.1 68414.m02110 MADS-box protein (AGL100) similar to tr... 28 5.2
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 6.9
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 6.9
At2g38820.1 68415.m04768 expressed protein contains Pfam profile... 27 6.9
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 27 9.1
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 157 bits (382), Expect = 4e-39
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 45 EAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
GTSQADCAVLI+ + TG FEAGIS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISK 129
Score = 129 bits (311), Expect = 2e-30
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIP 189
Query: 436 FVPISGWHGDNMLEPSTKMPWFKG 507
FVPISG+ GDNM+E ST + W+KG
Sbjct: 190 FVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 4e-39
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 45 EAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
GTSQADCAVLI+ + TG FEAGIS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISK 129
Score = 129 bits (311), Expect = 2e-30
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIP 189
Query: 436 FVPISGWHGDNMLEPSTKMPWFKG 507
FVPISG+ GDNM+E ST + W+KG
Sbjct: 190 FVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 4e-39
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 45 EAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
GTSQADCAVLI+ + TG FEAGIS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISK 129
Score = 129 bits (311), Expect = 2e-30
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIP 189
Query: 436 FVPISGWHGDNMLEPSTKMPWFKG 507
FVPISG+ GDNM+E ST + W+KG
Sbjct: 190 FVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (382), Expect = 4e-39
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMIT
Sbjct: 45 EAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMIT 104
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
GTSQADCAVLI+ + TG FEAGIS+
Sbjct: 105 GTSQADCAVLIIDSTTGGFEAGISK 129
Score = 129 bits (311), Expect = 2e-30
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +1
Query: 256 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVA 435
+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP +
Sbjct: 130 DGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIP 189
Query: 436 FVPISGWHGDNMLEPSTKMPWFKG 507
FVPISG+ GDNM+E ST + W+KG
Sbjct: 190 FVPISGFEGDNMIERSTNLDWYKG 213
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 103 bits (247), Expect = 9e-23
Identities = 43/82 (52%), Positives = 61/82 (74%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA+ GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI
Sbjct: 277 EAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIA 336
Query: 182 GTSQADCAVLIVAAGTGEFEAG 247
G +QAD A+L++ A G FEAG
Sbjct: 337 GATQADAAILVIDASVGAFEAG 358
Score = 61.7 bits (143), Expect = 3e-10
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Frame = +1
Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 438
GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + +++ +
Sbjct: 364 GQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFKDSSLTW 421
Query: 439 VPISGWHGDNML-EPSTK--MPWFKG-CRW-SVKKAKLTE-NASLKLSMPSC 576
+P+S N++ PS W++G C +V K + + S L MP C
Sbjct: 422 IPLSAMENQNLVAAPSDNRLSSWYQGPCLLDAVDSVKSPDRDVSKPLLMPIC 473
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = +2
Query: 2 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 181
EA++ + S+ A+++D + ER +G T+++ FET TI+DAPGH+ ++ NMI+
Sbjct: 139 EAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMIS 198
Query: 182 GTSQADCAVLIVAAGTGEFEAGISR 256
G SQAD VL+++A GEFE G R
Sbjct: 199 GASQADIGVLVISARKGEFETGYER 223
Score = 73.7 bits (173), Expect = 8e-14
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VA 435
GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GYN V
Sbjct: 225 GQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVV 284
Query: 436 FVPISGWHGDNMLEPSTK--MPWFKG 507
F+PISG G NM + + PW+ G
Sbjct: 285 FLPISGLMGKNMDQRMGQEICPWWSG 310
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 227 TG 232
G
Sbjct: 177 DG 178
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 399
QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 227 TG 232
G
Sbjct: 165 DG 166
Score = 35.5 bits (78), Expect = 0.026
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 262 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 441
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G + +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGS 229
Query: 442 PISGWHGDN 468
+S G N
Sbjct: 230 ALSALQGTN 238
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 47 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 214
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 215 VAAGTG 232
V A G
Sbjct: 183 VDASQG 188
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 227 TG 232
G
Sbjct: 168 GG 169
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 227 TG 232
G
Sbjct: 168 GG 169
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 7e-04
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 227 TG 232
G
Sbjct: 109 EG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 226
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 227 TG 232
G
Sbjct: 196 AG 197
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 44 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 224 GTG 232
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +2
Query: 44 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 224 GTG 232
G
Sbjct: 179 VEG 181
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.020
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 65 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 229
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 230 G 232
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.020
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +2
Query: 65 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 229
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 230 G 232
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.026
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +2
Query: 47 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 199
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 200 CAVLIVAAGTG 232
A+L+V A G
Sbjct: 161 GALLVVDAAQG 171
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 128 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 232
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 113 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.24
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 113 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 125 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 107 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 223
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 292 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 453
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g37010.1 68415.m04539 ABC transporter family protein contains
ABC transporter domain, Pfam:PF00005
Length = 1063
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 244 WYL*NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 420
W L NG H +L F G+ G + DST +S ++++K V ++ +N
Sbjct: 738 WMLHNGYPVPHDMLKFCDGLPSSSTGSAQEDSTHNSFSNDLWQDVKTNVEITKDQLQHN 796
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 134 IIDAPGHRDFIKNMITGTSQADCAVLIV 217
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 134 IIDAPGHRDFIKNMITGTSQADCAVLIV 217
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 134 IIDAPGHRDFIKNMITGTSQADCAVLIV 217
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 116 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 128 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 217
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 408 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGMQ 512
DW+ C AHF RR +GAF A G++
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGLE 721
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +2
Query: 53 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 220
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 221 AGTG 232
A G
Sbjct: 585 ADDG 588
>At3g07180.2 68416.m00856 GPI transamidase component PIG-S-related
similar to GPI transamidase component PIG-S
(Phosphatidylinositol-glycan biosynthesis, class S
protein) (Swiss-Prot:Q96S52) [Homo sapiens]
Length = 454
Score = 28.7 bits (61), Expect = 3.0
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +1
Query: 238 RSW-YL*NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR--FEEIKKEVSSYIKK 408
R W Y + Q + ALLA K L N ++ Y P+ F K++ SYI +
Sbjct: 270 RDWVYDWDFQRIDEALLAPV--TKALAPIANITVESQVLYHTPKSSFSSWDKKLQSYIFR 327
Query: 409 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGCRWSVKKAKLTE-NASL 555
P FV + WH D S + + ++S+K AKL + NASL
Sbjct: 328 TSDLPF---FVNSNEWHLDTSAGASGRSKILQFVKYSLKAAKLAQSNASL 374
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 355 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 444
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At2g38820.2 68415.m04769 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 310
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = -3
Query: 259 RSRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDC 83
RSR F +GT S D+ + S +C+ +L + + +SI N++ ++ E++ +C
Sbjct: 95 RSRCNCFSGSGTESSDDETECSSGEACE-ILKSLVLCKSIRVRNLLTDVTKIAETSKNC 152
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -1
Query: 330 FVYSYDELFDTEGESEQGMLTGLTVLEIPASNSPVPAATMSTA 202
+ ++ +L +T ESEQ + G ++ +P ++ PVP + +A
Sbjct: 14 YQFTNPDLLNTP-ESEQSNVIGSSITSVPVNDGPVPPLELDSA 55
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 361 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 471
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g17310.1 68414.m02110 MADS-box protein (AGL100) similar to
transcription factor GB:BAA25245 GI:2981610 from
[Ceratopteris richardii]; contains Pfam profile PF00319:
SRF-type transcription factor (DNA-binding and
dimerisation domain)
Length = 217
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +1
Query: 259 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 438
G ++ A L+ G K ++ +K D RF + + Y++K +P
Sbjct: 73 GLFKKSAELSVLTGAKIAVITFSKCDRIY------RFGHVDALIDKYLRK---SP----- 118
Query: 439 VPISGWHGDNMLEPSTKMPWFKGCRWSVKKAKLTE 543
V + G+ GDN + ++ PW++ SV + +L E
Sbjct: 119 VKLEGYSGDNAADEESRRPWWERPVESVPEEELEE 153
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 337 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 450
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 337 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 450
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At2g38820.1 68415.m04768 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 288
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -3
Query: 259 RSRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNID 86
RSR F +GT S D+ + S +C+ +L + + +SI N++ ++ E++ D
Sbjct: 95 RSRCNCFSGSGTESSDDETECSSGEACE-ILKSLVLCKSIRVRNLLTDVTKIAETSYD 151
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 27.1 bits (57), Expect = 9.1
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +1
Query: 358 EPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 471
+ + IKK++ ++ +I Y + + + GW G ++
Sbjct: 174 DDEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSL 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,817,513
Number of Sequences: 28952
Number of extensions: 289093
Number of successful extensions: 885
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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