Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0448.Seq
(775 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p ... 111 1e-23
UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep: Zgc:5... 90 5e-17
UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4; n... 90 7e-17
UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12... 88 3e-16
UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma j... 69 1e-10
UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RA... 65 2e-09
UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole gen... 61 3e-08
UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome a... 59 1e-07
UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep: F17... 56 7e-07
UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;... 56 1e-06
UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, wh... 54 3e-06
UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein RA... 54 5e-06
UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1; ... 53 9e-06
UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11; Liliopsida|... 51 3e-05
UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2; ... 51 3e-05
UniRef50_UPI0000D9E6A9 Cluster: PREDICTED: similar to ribosome a... 42 0.013
UniRef50_Q553P6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.49
UniRef50_Q5ATU0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.49
UniRef50_UPI0000D56160 Cluster: PREDICTED: similar to CG17922-PA... 34 4.5
>UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p -
Drosophila melanogaster (Fruit fly)
Length = 64
Score = 111 bits (268), Expect = 1e-23
Identities = 51/64 (79%), Positives = 57/64 (89%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 243
MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1 MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60
Query: 244 IRLA 255
IR A
Sbjct: 61 IRAA 64
>UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep:
Zgc:56419 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 66
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/64 (67%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTK-EKEDQYPVAPWLLALFIFVVCGSAVFQIIQ 240
M KQR+R+ANE SKNIT+RGNV K+T+ +E++ V PWLLALF+FVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITLRGNVAKSTRGTQEEKAVVGPWLLALFVFVVCGSAIFQIIQ 60
Query: 241 SIRL 252
SIR+
Sbjct: 61 SIRM 64
>UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4;
n=33; Eumetazoa|Rep: Ribosome-attached membrane protein
4 - Homo sapiens (Human)
Length = 66
Score = 89.8 bits (213), Expect = 7e-17
Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 240
M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60
Query: 241 SIRL 252
SIR+
Sbjct: 61 SIRM 64
>UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12.5;
n=2; Bilateria|Rep: Putative uncharacterized protein
T09A12.5 - Caenorhabditis elegans
Length = 63
Score = 87.8 bits (208), Expect = 3e-16
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 243
MAPKQRM +AN SKN+T RGNVPK K E ++P + WL+ LFIFVVCGSA+F++I+
Sbjct: 1 MAPKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRY 60
Query: 244 IRL 252
I++
Sbjct: 61 IKV 63
>UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02042 protein - Schistosoma
japonicum (Blood fluke)
Length = 79
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = +1
Query: 61 KMAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ 240
+M+ QRM++ N A N+ RGNVPK+ K + Q + +L L +FVVCGSAVF+IIQ
Sbjct: 14 RMSASQRMKVQNGKAHGNVVNRGNVPKSLKSSDSQSNMNACILGLIVFVVCGSAVFEIIQ 73
Query: 241 SIRLA 255
IR+A
Sbjct: 74 HIRMA 78
>UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RAMP4
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Ribosome associated membrane protein RAMP4
containing protein - Tetrahymena thermophila SB210
Length = 107
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +1
Query: 73 KQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSI 246
KQ+M++ + + +KN+T RG VP + K KE++ V PW+L +F+FVV GSA+FQI+ +
Sbjct: 48 KQQMKLKSNLHNKNVTNRGKVPSSLKSKEEK-SVGPWVLGIFLFVVVGSAIFQILNVV 104
>UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +1
Query: 109 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 243
KNIT RG+VP+TT +K YPV P LL F+FVV GS++FQII++
Sbjct: 54 KNITKRGSVPETTTKKGSDYPVGPVLLGFFVFVVIGSSLFQIIRT 98
>UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome
attached membrane protein 4; n=1; Pan troglodytes|Rep:
PREDICTED: similar to ribosome attached membrane protein
4 - Pan troglodytes
Length = 231
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +1
Query: 136 PKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 252
P+ E++ V PWLLALFIFVVCGSA+FQIIQSIR+
Sbjct: 191 PRPRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRM 229
>UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep:
F17L21.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 77
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +1
Query: 109 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 243
KNI RG VP+TT +K YPV P LL F+FVV GS++FQII++
Sbjct: 26 KNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRT 70
>UniRef50_Q7RG55 Cluster: Arabidopsis thaliana F17L21.12-related;
n=3; Plasmodium|Rep: Arabidopsis thaliana
F17L21.12-related - Plasmodium yoelii yoelii
Length = 67
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 243
MA +++ E NIT RGNVP + +K +Y V P LL +FIF+V GS V QI+
Sbjct: 1 MASNRKINKKIETFDNNITNRGNVPTSIAKKGKKYTVGPILLGIFIFIVIGSVVIQILNI 60
Query: 244 IRLAKS 261
+ +KS
Sbjct: 61 LSKSKS 66
>UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 75
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +1
Query: 76 QRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 237
Q M++ ++ N+ +G VPK+ +KE+ PV P LL +F+FVV GSA+FQI+
Sbjct: 13 QTMKLRSQNYQGNVNKQGKVPKSLIKKEENLPVGPILLGVFLFVVVGSALFQIL 66
>UniRef50_A5KBT3 Cluster: Ribosome associated membrane protein
RAMP4, putative; n=3; Plasmodium|Rep: Ribosome
associated membrane protein RAMP4, putative - Plasmodium
vivax
Length = 102
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 58 NKMAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 237
+KMA +++ NIT RGNVP + +K ++PV P LL +F+FVV GS Q++
Sbjct: 33 SKMASNRKISQKINAFDNNITHRGNVPASLVKKGKKHPVGPILLVIFVFVVIGSVFIQML 92
Query: 238 QSIRLAK 258
I+ +K
Sbjct: 93 SMIQKSK 99
>UniRef50_Q5CPN8 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 65
Score = 52.8 bits (121), Expect = 9e-06
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 243
MA + ++ E+ KNI RG+V ++ +K+ YPV P+ L LFIFVV GSA+ Q+I S
Sbjct: 1 MAQSRFTKLKGELYEKNIDKRGSV--SSSKKKSGYPVGPFALGLFIFVVIGSAIIQMIVS 58
>UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11;
Liliopsida|Rep: Os11g0637400 protein - Oryza sativa
subsp. japonica (Rice)
Length = 573
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 109 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGS 219
KNIT RG+VP+TT +K + YPV P +L FIFVV GS
Sbjct: 27 KNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 63
>UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 460
Score = 51.2 bits (117), Expect = 3e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 109 KNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGS 219
KNIT RG+VP+TT +K + YPV P +L FIFVV GS
Sbjct: 17 KNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGS 53
>UniRef50_UPI0000D9E6A9 Cluster: PREDICTED: similar to ribosome
associated membrane protein 4; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosome associated membrane
protein 4 - Macaca mulatta
Length = 177
Score = 42.3 bits (95), Expect = 0.013
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKE 153
M KQR+R+ANE SKNIT RGNV KT K+
Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTLKK 30
>UniRef50_Q553P6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 59
Score = 37.1 bits (82), Expect = 0.49
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQ 240
M+ + +R ++ +NI RG + K+KED + P++L IFVV GS + QI++
Sbjct: 1 MSQSRTLRQKSQKYQENIEKRGVA--SPKKKEDGLNINPYVLGFIIFVVVGSTLLQILK 57
>UniRef50_Q5ATU0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 78
Score = 37.1 bits (82), Expect = 0.49
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 64 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYP-VAPWLLALFIFVVCGSAVFQIIQ 240
M + R ANE +K+ + PKTT K + P ++ + L FVVCG VF++++
Sbjct: 1 MTQTPQQRRANEKFAKHEASKRGKPKTTTTKHNTKPSLSTGWVVLLAFVVCGGLVFELLR 60
Query: 241 SI 246
+
Sbjct: 61 IV 62
>UniRef50_UPI0000D56160 Cluster: PREDICTED: similar to CG17922-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG17922-PA - Tribolium castaneum
Length = 715
Score = 33.9 bits (74), Expect = 4.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 103 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLAKS 261
A+K T G PK T+E E + WL+ +F+F + + II + +K+
Sbjct: 352 ATKTATSIGKNPKPTQEIEYMFMTVSWLMGVFVFALLIGQIRDIISTATRSKT 404
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,501,626
Number of Sequences: 1657284
Number of extensions: 12919238
Number of successful extensions: 29411
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 28566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29394
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -