Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0448.Seq
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   3.4  
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    24   4.5  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = -3

Query: 170 GYWSSFSLVVLGTFPLIVMFLLAISFAIR-ILCLGAILFCYKVYLSVYY 27
           G W S  LVVL       +      F      CL A++F YK   +V++
Sbjct: 613 GTWISIILVVLVAVDASALVCYITRFTEENFACLIAVIFIYKAIENVFH 661


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 275 SSCLRDLASLIDWIIWNTAEPHTTKMKRARSQGATGYWSSFSLVVLG 135
           S CL  L SLID  I+   E          S+   G+W   ++ V G
Sbjct: 18  SLCLLGLPSLIDAKIYTKCELAKQLTANGISRTYQGHWVCLAIAVSG 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,323
Number of Sequences: 2352
Number of extensions: 15312
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)