Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0447.Seq
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   0.51 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 362 HPMCP*SSFSNPSLSIILLVTINRFWNCLSMSPRSRPPP 246
           HP+C      +P+ ++ L  + NR+W C    PR +  P
Sbjct: 153 HPLCN----DDPNGNVPLGKSCNRYWQCQGGYPRLQRCP 187


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 245 LAVAESEVTSTGSSKTD 295
           L+  ESE+TS G SK D
Sbjct: 6   LSAVESEITSGGKSKGD 22


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 415 LMPMRELIHQHSTLGS 368
           L P+   +H HST+G+
Sbjct: 399 LSPLPSSVHSHSTIGN 414


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 380 HSRQLTHPMCP*SSFSNPS 324
           HS+Q    +CP   F +PS
Sbjct: 245 HSKQNVALLCPAQGFPSPS 263


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 352 HMGCVNCLEWNADGS 396
           H GC  C E   +GS
Sbjct: 72  HSGCSKCTEKQKEGS 86


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 293 RFWNCLSMSPRSRPP 249
           RFW CL  +P  +PP
Sbjct: 25  RFWECL--APIPQPP 37


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 418 DLHVILWDPYRYKQ 459
           ++ +I+W P+ YKQ
Sbjct: 147 EMPLIVWFPFDYKQ 160


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 293 RFWNCLSMSPRSRPP 249
           RFW CL  +P  +PP
Sbjct: 25  RFWECL--APIPQPP 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,003
Number of Sequences: 336
Number of extensions: 2405
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)