Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0447.Seq
(505 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 83 1e-16
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 73 1e-13
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 67 5e-12
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 56 2e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 48 4e-06
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 48 5e-06
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 40 7e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 40 7e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 39 0.002
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 39 0.002
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 39 0.002
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 39 0.002
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 38 0.003
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 38 0.003
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 38 0.003
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 38 0.004
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 38 0.004
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 38 0.004
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 38 0.005
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 38 0.005
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 37 0.007
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 37 0.007
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 37 0.009
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 37 0.009
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 36 0.012
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 36 0.012
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 36 0.020
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 36 0.020
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 35 0.036
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 35 0.036
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 35 0.036
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 35 0.036
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 34 0.047
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 34 0.063
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 34 0.063
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 33 0.083
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 33 0.11
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 33 0.11
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 33 0.11
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.11
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 33 0.11
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 33 0.11
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.14
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 33 0.14
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 33 0.14
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 33 0.14
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 32 0.19
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 32 0.19
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 32 0.19
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.19
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 32 0.19
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 32 0.19
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 32 0.25
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 32 0.25
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 32 0.25
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 32 0.25
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 32 0.25
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 31 0.33
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 31 0.33
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 31 0.33
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 31 0.44
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 31 0.44
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 31 0.44
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 31 0.44
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 31 0.44
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 31 0.58
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 31 0.58
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 31 0.58
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 31 0.58
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 31 0.58
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 31 0.58
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 31 0.58
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 31 0.58
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 30 0.77
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 30 0.77
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 30 0.77
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 30 0.77
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 30 0.77
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 30 0.77
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 30 0.77
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 30 0.77
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 30 0.77
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 30 1.0
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 30 1.0
At4g33290.1 68417.m04736 F-box family protein contains Pfam PF00... 30 1.0
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 30 1.0
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 30 1.0
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 30 1.0
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 30 1.0
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 29 1.3
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 29 1.3
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 29 1.3
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 29 1.3
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 29 1.3
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 29 1.3
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 29 1.3
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 29 1.8
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 29 1.8
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 29 1.8
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 29 1.8
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 29 1.8
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 29 1.8
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 29 1.8
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 29 2.4
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 29 2.4
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 2.4
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 29 2.4
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 28 3.1
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 28 3.1
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 28 3.1
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 28 3.1
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 28 3.1
At3g17620.1 68416.m02251 F-box family protein contains Pfam prof... 28 3.1
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 28 3.1
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 28 3.1
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 28 3.1
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 28 3.1
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 28 3.1
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 28 3.1
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 3.1
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 28 4.1
At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine deacet... 28 4.1
At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine deacet... 28 4.1
At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine deacet... 28 4.1
At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine deacet... 28 4.1
At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine deacet... 28 4.1
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 27 5.4
At4g31980.1 68417.m04547 expressed protein contains Pfam profile... 27 5.4
At3g49520.1 68416.m05412 F-box family protein contains weak hit ... 27 5.4
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 27 5.4
At3g19890.1 68416.m02518 F-box family protein contains F-box dom... 27 5.4
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 27 5.4
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 27 5.4
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 27 5.4
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 27 5.4
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 27 5.4
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 27 5.4
At2g30730.1 68415.m03748 serine/threonine protein kinase, putati... 27 5.4
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 27 5.4
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 27 7.2
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 27 7.2
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 7.2
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 27 7.2
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 27 7.2
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 27 9.5
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 27 9.5
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 9.5
At1g54550.1 68414.m06221 F-box family protein contains Pfam:PF00... 27 9.5
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 27 9.5
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 27 9.5
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +1
Query: 268 DIDRQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPY 447
D + R+ S++ RL E+EL+GH GCVN L WN++GS+L S SDDL + +W+
Sbjct: 21 DPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYS 80
Query: 448 RYKQLHNIATGHTGDIF 498
K LH+I TGHT +IF
Sbjct: 81 SRKLLHSIDTGHTANIF 97
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDP 444
L K L G +NC++ + SV+A++ D + +W P
Sbjct: 655 LMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSP 692
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RERGDI-DRQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVI 432
RE G + +R F NR + ++ RLGL+K+L H GCVN + +NADG +L S SDD VI
Sbjct: 21 RELGLLPNRSFSNRFSASEDLLRRLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVI 80
Query: 433 LWDPYRYKQLHNIATGHTGDIF 498
LWD + +GH +IF
Sbjct: 81 LWDWQTASVKLSFDSGHFNNIF 102
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 67.3 bits (157), Expect = 5e-12
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 RERGDID-RQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVI 432
RE G I R F NR + +++ RL + K+L+ H GCVN + +NA+G VL S SDD V+
Sbjct: 25 REVGGISSRNFSNRFSASENLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVV 84
Query: 433 LWDPYRYKQLHNIATGHTGDIF 498
LWD + +GH ++F
Sbjct: 85 LWDWQLGNVKLSFHSGHANNVF 106
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +1
Query: 292 RLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNI 471
R+ + + +L L +L GH GCVN +E+N+ G VL S SDD ++LW+ + +
Sbjct: 34 RISASEGRVKKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSY 93
Query: 472 ATGHTGDIF 498
+GH ++F
Sbjct: 94 PSGHCENVF 102
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
K GH G VNC++W+ GS+LAS SDD +W+ + +H++ HT +I+++
Sbjct: 442 KTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLRE-HTKEIYTI 496
Score = 32.3 bits (70), Expect = 0.19
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD--PYRYKQLHNIATGHTGDI 495
L H G + L+WN G L + S D ++WD +KQ +G T D+
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDV 413
Score = 30.7 bits (66), Expect = 0.58
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
V L+WN +G++LA+ S D +W +L + + H G IFS+
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWT--LNGELISTLSKHKGPIFSL 371
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
L+GH V W+ S+LAS S D +W
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIW 292
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
K L+GH ++C++++ DG++LASAS D +ILW Y +H GH+ I
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY-EGHSSGI 88
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+GH ++ L W++D SASDD + +WD + + GHT +F V
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCV 134
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
K L+GH V C+ +N +++ S S D + +W+
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
++ H ++ + +N DGS++ SAS D +WD
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+GH+G V + W+AD +L S S D + +W+ R K+L GH ++F+V
Sbjct: 399 RGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE-IRTKKLKQDLPGHADEVFAV 450
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = +1
Query: 334 EKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+K L GH VN + ++ DG +ASAS D V LW+ Q + GH G ++ V
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT-GQFVTVFRGHVGPVYQV 408
Score = 36.7 bits (81), Expect = 0.009
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+ GH V C+ ++ DG LAS S D V LWD Y L GH + +V
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFT-CKGHKNWVLTV 157
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
L GH V C++W DG ++ + S D + +W+ + K + + GH
Sbjct: 237 LSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIREL-KGH 281
Score = 30.7 bits (66), Expect = 0.58
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+GH V + W+ DG L S S + W+P + + + TGH
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGH 193
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
L+++L GH V ++W+ DG + S D + LW
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 400 LASASDDLHVILWDPYRYKQLHNIATGH 483
L S SDD + LW+P KQ TGH
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGH 359
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 40.3 bits (90), Expect = 7e-04
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLH--NIATGHTGDI 495
L+GH V + WNA GS LA+ S D V +W+ + + TGHT D+
Sbjct: 114 LEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDV 166
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWN-ADGS-VLASASDDLHVILW 438
L K+ + H VN ++W+ +G+ +LASASDD V +W
Sbjct: 309 LLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIW 346
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILW 438
GH V + +NA G + + SDDL + +W
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADG-SVLASASDDLHVILWDPYRYKQ 459
EL GH G VNC+ W+ +LASASDD + +W R Q
Sbjct: 526 ELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQ 566
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD--PYRYKQLHNIA--TGHTGDI 495
L+GH V + WNA GS+LA+ D V +W+ P + IA TGH+ D+
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDV 142
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILW 438
GH V + +NA G + + SDDL V +W
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATG 480
L L GH G +N + + DGS+ AS D ++LWD K+L+++ G
Sbjct: 185 LRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 334 EKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
++ L GH V + ++DG S S D + LWD + GHT D+ SV
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRF-VGHTKDVLSV 111
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 373 LEWNADGSVLASASDDLHVILWDPYRY 453
L W+ADGS L S D V +W RY
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGIGRY 326
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATG 480
L L GH G +N + + DGS+ AS D ++LWD K+L+++ G
Sbjct: 185 LRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 334 EKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
++ + GH V + ++DG S S D + LWD + GHT D+ SV
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRF-VGHTKDVLSV 111
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L GH V ++WN +G+ L +AS D + L+D K+L + GHT D+ S+
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSF-RGHTKDVTSL 358
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 322 RLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFS 501
R G+ GH V ++W+ S+L S D V LWD ++L ++ GH + S
Sbjct: 257 RFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSL-HGHKNIVLS 315
Query: 502 V 504
V
Sbjct: 316 V 316
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIA 474
L+GH + L W +DGS + SAS D V WD KQ+ +A
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMA 135
Score = 31.9 bits (69), Expect = 0.25
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L GH V +++N G+++AS S D + LW + + + GH I +
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Score = 31.1 bits (67), Expect = 0.44
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
W+ DG+ + + S D V +WD + ++ + GHTG +
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKL-PGHTGSV 317
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 322 RLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
RL LEK L H V CL + ++AS SDD VI+WD
Sbjct: 3369 RLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWD 3408
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 343 LQGHMGCVNCLEWN-ADGSVLASASDDLHVILWDP 444
L GH VNC+ WN + +LASASDD + +W P
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWGP 515
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/57 (22%), Positives = 26/57 (45%)
Frame = +1
Query: 319 DRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTG 489
+++ L+ L+ H V+ + W+ D + L + + + LWD H +TG
Sbjct: 257 NKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTG 313
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1
Query: 322 RLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
RL LEK L H V CL + ++AS+SDD VI+WD
Sbjct: 3313 RLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWD 3352
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 334 EKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
E H G V L +N GS+LAS S D +ILWD
Sbjct: 99 EVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWD 134
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+D L L GH V C++ ++DG ++ + S D ++ +W
Sbjct: 569 MDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L+GH V L + G L S+S D + +WD + I +GH +++SV
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD-LETQHCMQIVSGHHSEVWSV 196
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L GH CV L ++ +GS+LAS S D V LWD
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILWD 441
GH V L + DG +AS +D +++WD
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 569
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 286 QNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
+NR+ ++ + + + H G +NC + DGS++A D + +WD
Sbjct: 330 RNRVQLSSVAMPSVSFYTFVNTHNG-LNCSSISHDGSLVAGGFSDSSIKVWD 380
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
+DR+ + + GH+ V +W+ + + +A+ S D V LWD + + I GH +
Sbjct: 489 MDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWD-VQTGECVRIFIGHRSMV 544
Query: 496 FSV 504
S+
Sbjct: 545 LSL 547
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
GH V C ++ DG ++ + SDD +I+W+P + +H I GH
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIH-IVKGH 238
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
EL GH V+CL ++ DG +LAS D V ++D
Sbjct: 108 ELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFD 141
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
L+GH+ V + W+ GS +AS SDD VI+W + H GH
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHR-TDGH 201
Score = 33.1 bits (72), Expect = 0.11
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 250 GGRERGDIDRQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDD 420
GG + +D+ QN + T+ L L+ H G VNC+ W + +AS SDD
Sbjct: 31 GGGDHKSVDKDLQN--IDTKER-----LLATLRDHFGSVNCVRWAKNSRYVASGSDD 80
Score = 31.1 bits (67), Expect = 0.44
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
L+GH V L W+ D S+LAS S D V +W+ R + GH
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWN-MRTGMCTTVLRGH 159
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILW---DPYRYKQLHNIATGHTGDIFSV 504
L+ H VN L N DGSVL S S D +++W D Y + GH I S+
Sbjct: 276 LEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL 332
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNI 471
+ LQGH G V L+W + + + SAS D +I+W+ ++ H I
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAI 103
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNI 471
+ LQGH G V L+W + + + SAS D +I+W+ ++ H I
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAI 103
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 325 LGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
LGL+++ H ++CL +ADGS L + S D ++ +W
Sbjct: 333 LGLQQD--SHRNRISCLGLSADGSALCTGSWDSNLKIW 368
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW--DPYRYKQLHNI-ATGHTGDI 495
+E QGH V+ + WN++G+ LAS S D +W +P+ + + ++ GHT +
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSV 69
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 36.3 bits (80), Expect = 0.012
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNI 471
L L GH G V+ + + DGS+ AS D V+LWD K+L+++
Sbjct: 186 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 334 EKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
++ L GH V + ++DG S S D + LWD GHT D+ SV
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRF-VGHTKDVLSV 111
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.5 bits (78), Expect = 0.020
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGS----VLASASDDLHVILWDPYRYKQLHNIATGHTGDIFS 501
E +GH VN + +++D + VL S S D + WD ++Q+ I TG+ +IFS
Sbjct: 78 ECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFS 135
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 35.5 bits (78), Expect = 0.020
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L L+GH G V + ++D + S SDDL VI+WD + L + GH + V
Sbjct: 891 LRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTTQLLEEL-KGHDSQVSCV 945
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 373 LEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
LE++ +LA+A D +WD KQ+H + GHT I S+
Sbjct: 986 LEYDDSTGILAAAGRDTVANIWDIRSGKQMHKL-KGHTKWIRSI 1028
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHT 486
L GH G + + W+ DGS + S SDD +W+ + + + GH+
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHT 486
L GH G + + W+ DGS + S SDD +W+ + + + GH+
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHS 278
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 34.7 bits (76), Expect = 0.036
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 250 GGRERGDIDRQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGS-VLASASDDLH 426
GG G+ID N L + S L L H G V LE+NA S +LAS +DD
Sbjct: 89 GGLVDGNID--LWNPLSLIGSQPSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGE 146
Query: 427 VILWD 441
+ +WD
Sbjct: 147 ICIWD 151
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 34.7 bits (76), Expect = 0.036
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 250 GGRERGDIDRQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGS-VLASASDDLH 426
GG G+ID N L + S L L H G V LE+NA S +LAS +DD
Sbjct: 89 GGLVDGNID--LWNPLSLIGSQPSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGE 146
Query: 427 VILWD 441
+ +WD
Sbjct: 147 ICIWD 151
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 34.3 bits (75), Expect = 0.047
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 310 SMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTG 489
+M+ ++ K+L+GH V C ++ G + + SDD V +W L + GH G
Sbjct: 290 TMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLAS-CRGHEG 348
Query: 490 DI 495
DI
Sbjct: 349 DI 350
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +1
Query: 289 NRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHN 468
+RL+ SM L L +GH G + L +++ +++ASAS+D + +W + +
Sbjct: 326 DRLVKIWSMETALCLAS-CRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPI-S 383
Query: 469 IATGHTGDIFSV 504
+ GHTG + ++
Sbjct: 384 VLRGHTGAVTAI 395
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 33.9 bits (74), Expect = 0.063
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT 477
+ CL + ADG++L S S+D V +WDP K L ++ T
Sbjct: 266 ITCLAYCADGNLLISGSEDGVVCVWDP---KSLRHVRT 300
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYR 450
L K+ GH V CL ++ D S+L S S D + +W R
Sbjct: 112 LLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIR 151
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 33.9 bits (74), Expect = 0.063
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 322 RLGLEK--ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT 477
RL ++K L GH G V +EW+ G LAS D V LW + H AT
Sbjct: 267 RLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWHEQAT 320
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 33.5 bits (73), Expect = 0.083
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L KE +GH VN + +DGS + +AS D V +WD
Sbjct: 339 LLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYR 450
L+GH G V +N DG+ + D + LW+P+R
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHR 49
Score = 31.1 bits (67), Expect = 0.44
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
++ +GH G VN +++N SV+ SA D + +WD
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 33.1 bits (72), Expect = 0.11
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 310 SMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTG 489
SM+ ++ K L+GH V C + G + + SDD V +W L + GH G
Sbjct: 230 SMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLAS-CRGHEG 288
Query: 490 DI 495
DI
Sbjct: 289 DI 290
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIF 498
VN + W+ D + +A D + +W+ +H++ TGHT +
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSL-TGHTASTY 590
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G V + W DG LA D+ V LWD +Q+ + GH + S+
Sbjct: 135 GPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL 183
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILWD 441
GH V L+W+ G LAS +D V +WD
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPY 447
EL GH V + + DG +ASA+ D + LW+ +
Sbjct: 350 ELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF 385
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G V + W DG LA D+ V LWD +Q+ + GH + S+
Sbjct: 169 GPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSL 217
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
QGH VNC+ ++ D +LA+ +DD V +W+
Sbjct: 346 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 377
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT 477
H V L + AD L SAS D V WD RYK T
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTT 431
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
QGH VNC+ ++ D +LA+ +DD V +W+
Sbjct: 386 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 417
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT 477
H V L + AD L SAS D V WD RYK T
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTT 471
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G V + W DG LA D+ V LWD +Q+ + GH + S+
Sbjct: 166 GPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSL 214
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 32.7 bits (71), Expect = 0.14
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
I + G +GH VN L + DG + S +D V +WD K LH + H G I
Sbjct: 223 IRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS-HEGKI 281
Query: 496 FSV 504
S+
Sbjct: 282 QSL 284
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 364 VNCLEWNADG-SVLASASDDLHVILWDPYR 450
V CL +N DG SVL + L + W+P R
Sbjct: 323 VRCLTFNPDGKSVLCGLQESLKIFSWEPIR 352
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTG 489
E + H G + L+++ +LA+ S D V WD ++ + + T TG
Sbjct: 273 EFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTG 322
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 32.7 bits (71), Expect = 0.14
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
++ + LQGH +N + W+ G LAS S+D+ V +W
Sbjct: 805 VETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDM-VKVW 844
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILW 438
V C +++DG +LASA D +LW
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLW 678
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 32.7 bits (71), Expect = 0.14
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
L+GH+ W+ +G +LA+ + D LWD Q + G+ G I
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAI 365
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
K L+G+MG + L + +DG LA A V L+D
Sbjct: 356 KVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFD 390
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+E+Q H G + ++++ DG LASA +D + +W
Sbjct: 357 QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 32.3 bits (70), Expect = 0.19
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+D LEK L GH V ++ DG L +AS D+ LW K++ + GH
Sbjct: 240 VDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEV-KVYQGH 294
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 340 ELQGHMGCV-NCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+LQ H G + CL A+ LA+AS D V +W+ +K L + TGH
Sbjct: 206 KLQAHNGHILKCLLSPAN-KYLATASSDKTVKIWNVDGFK-LEKVLTGH 252
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.3 bits (70), Expect = 0.19
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT--GHTGDIFSV 504
H VNC+ + DGS + S D I++D + L +++ GH G I++V
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAV 238
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 289 NRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
NR V + R K + H +NCL W+ + +++A+ S D VI+++
Sbjct: 512 NREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYE 562
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 319 DRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
D L E L+ H G ++ + ++ D S+ ASA + ++WD
Sbjct: 479 DSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWD 519
Score = 29.5 bits (63), Expect = 1.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILWD 441
GH G + + W+ DG + + S D +WD
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+E+Q H G + ++++ DG LASA +D + +W
Sbjct: 407 QEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIW 440
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 385 ADGSVLASASDDLHVILW 438
ADG + SAS+D HV +W
Sbjct: 699 ADGKYVVSASEDSHVYIW 716
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 32.3 bits (70), Expect = 0.19
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT--GHTGDIFSV 504
H VNC+ ++ DG+ + S D +++D ++ +A+ GH G I++V
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAV 102
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +1
Query: 319 DRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
D++G GH G + + W+ D + + S D +W+
Sbjct: 84 DKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 32.3 bits (70), Expect = 0.19
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYK 456
+ ++ H V+C+ AD ++LA+ S D V++WD R +
Sbjct: 1040 QSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILRMR 1079
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 31.9 bits (69), Expect = 0.25
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L LQ H VN + ++D S SASDD V +WD
Sbjct: 1073 LVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+E GH ++ + +++D + SASDD + LWD L GHT F V
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWD-VETGSLIKTLIGHTNYAFCV 119
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L K L GH C+ +N +++ S S D V +WD K L + H+ + +V
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAV 161
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
K L H V +++N DGS++ S+S D +WD
Sbjct: 149 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 31.9 bits (69), Expect = 0.25
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSV-LASASDDLHVILWD 441
ELQ H VN + W S + SA DD ++WD
Sbjct: 262 ELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWD 296
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 31.9 bits (69), Expect = 0.25
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 235 HLRSGGGRERGDIDRQFQNRLMVTRSMIDRLGLEKEL---QGHMGCVNCLEWNADGSVLA 405
H+ GGG++ + D++ L++E+ +GH G +N L +N DG +
Sbjct: 248 HVVLGGGQDASAVTTTDHRAGKFEAKFYDKI-LQEEIGGVKGHFGPINALAFNPDGKSFS 306
Query: 406 SASDDLHVIL 435
S +D +V L
Sbjct: 307 SGGEDGYVRL 316
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
+GH G V C + + D S L + S D LWD K+L
Sbjct: 49 RGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 31.9 bits (69), Expect = 0.25
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 235 HLRSGGGRERGDIDRQFQNRLMVTRSMIDRLGLEKEL---QGHMGCVNCLEWNADGSVLA 405
H+ GGG++ + D++ L++E+ +GH G +N L +N DG +
Sbjct: 248 HVVLGGGQDASAVTTTDHRAGKFEAKFYDKI-LQEEIGGVKGHFGPINALAFNPDGKSFS 306
Query: 406 SASDDLHVIL 435
S +D +V L
Sbjct: 307 SGGEDGYVRL 316
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
+GH G V C + + D S L + S D LWD K+L
Sbjct: 49 RGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 31.5 bits (68), Expect = 0.33
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
+ L + +E+Q H G + ++++ D +LASA +D + +W+
Sbjct: 398 LSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWE 439
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 31.5 bits (68), Expect = 0.33
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNAD-GSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIF 498
+ +GH V C++W+ D SV S+++D + +WD R + AT +F
Sbjct: 370 KFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLF 423
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 31.5 bits (68), Expect = 0.33
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNAD-GSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIF 498
+ +GH V C++W+ D SV S+++D + +WD R + + A +F
Sbjct: 381 KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLF 434
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 31.1 bits (67), Expect = 0.44
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G V + W DG +A ++ V LWD +QL + GH + S+
Sbjct: 183 GPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSL 231
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 295 LMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L++ + R + + +GH V L+W+ G LAS +D V +WD
Sbjct: 246 LIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 31.1 bits (67), Expect = 0.44
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G V + W DG +A ++ V LWD +QL + GH + S+
Sbjct: 173 GPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSL 221
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 295 LMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L++ + R + + +GH V L+W+ G LAS +D V +WD
Sbjct: 236 LIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 31.1 bits (67), Expect = 0.44
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
+ GH G V L + DG+VL S D V LW+
Sbjct: 94 QFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWN 127
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
V C++++ D + + S SDD ++ LW +QL
Sbjct: 325 VFCVKYSCDATYVISGSDDTNLRLWKAKASEQL 357
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+EL GH G V L W +D ++L SAS D V LW
Sbjct: 266 QELYGHTGDVLDLAW-SDSNLLLSASKDKTVRLW 298
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+++ GH G + L+++ DG LA+ +D V +W
Sbjct: 192 QKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 31.1 bits (67), Expect = 0.44
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSV-LASASDDLHVILWD 441
ELQ H VN + W S + +A DD ++WD
Sbjct: 262 ELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWD 296
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 30.7 bits (66), Expect = 0.58
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+E+Q H G + ++++ DG LASA +D + +W
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 30.7 bits (66), Expect = 0.58
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+E+Q H G + ++++ DG LASA +D + +W
Sbjct: 245 QEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 30.7 bits (66), Expect = 0.58
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
++ L + +GH G V + +A G +LA+A D V++WD H GH G +
Sbjct: 89 LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYF-RGHKGVV 147
Query: 496 FSV 504
S+
Sbjct: 148 SSI 150
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIAT 477
++ H V + + DG L SA D V LWD + Y +AT
Sbjct: 188 MEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVAT 232
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 343 LQGHMGCVNCLEW--NADGSVL-ASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L GH V L+ ++ G+VL + S D V LW+ K + TGH GDI +V
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATS-KSCIGVGTGHNGDILAV 452
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGS--VLASASDDLHVILWD 441
+GH G V+ + ++ D + +L S SDD V +WD
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+L+GH V L ++ G S S D + LWD + + LH A HT ++++
Sbjct: 250 KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV-HTDSVWAL 303
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
+GH V L N G++L S + + +WDP + + GHT ++
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKL-RGHTDNV 258
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 30.7 bits (66), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+L+GH V L ++ G S S D + LWD + + LH A HT ++++
Sbjct: 250 KLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV-HTDSVWAL 303
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
+GH V L N G++L S + + +WDP + + GHT ++
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKL-RGHTDNV 258
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGS-VLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
++ +++ H VN L +N VLA+AS D V L+D + ++ + H G++F V
Sbjct: 252 MQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQV 310
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADG-SVLASASDDLHVILWD 441
+ H G V +EW+ + +VLAS+ +D +++WD
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 30.7 bits (66), Expect = 0.58
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+++E H G + ++++ DG +ASA +D V +W
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
E +GH+G + L W+ G +L+S+ D+ V LW
Sbjct: 317 EFKGHIGEILDLSWSEKGYLLSSSVDET-VRLW 348
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 30.7 bits (66), Expect = 0.58
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+++E H G + ++++ DG +ASA +D V +W
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
E +GH+G + L W+ G +L+S+ D+ V LW
Sbjct: 317 EFKGHIGEILDLSWSEKGYLLSSSVDET-VRLW 348
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+ K L H V L+W+ D + L S S D I+WD + +H I H
Sbjct: 45 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK-GSVHQILDAH 94
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+ K L H V L+W+ D + L S S D I+WD + +H I H
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK-GSVHQILDAH 153
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+ K L H V L+W+ D + L S S D I+WD + +H I H
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNK-GSVHQILDAH 153
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+L GH V L+W+ D LAS +D +++W+ + + + + T HT + ++
Sbjct: 293 KLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKL-TEHTAAVKAI 346
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 30.3 bits (65), Expect = 0.77
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 325 LGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
LGL+++ H ++CL +ADGS L + S D ++ +W
Sbjct: 271 LGLQQD--SHRNRISCLGLSADGSALCTGSWDSNLKIW 306
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 30.3 bits (65), Expect = 0.77
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATG 480
+GH G V C + + D S L + S D LWD K+L G
Sbjct: 76 RGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFG 120
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 235 HLRSGGGRERGDIDRQFQNRLMVTRSMIDRLGLEKEL---QGHMGCVNCLEWNADGSVLA 405
H+ GGG++ + D + L++E+ +GH G +N L ++ DG +
Sbjct: 275 HVVLGGGQDASAVTTTDHRAGKFEAKFYDTI-LQEEIGGVKGHFGPINALAFSPDGKSFS 333
Query: 406 SASDDLHVIL 435
S +D +V L
Sbjct: 334 SGGEDGYVRL 343
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 30.3 bits (65), Expect = 0.77
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+D LEK L GH V +++ DG L +AS D LW
Sbjct: 246 LDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLW 286
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
H+ V+ L + DGS+L SAS D +W +K L +I H I ++
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAI 241
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L H+ VN L + DG VL S + D +++W+
Sbjct: 274 LTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
GH + +E++ G LAS S D ++ +WD R K GHT I ++
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDT-RKKGCIQTYKGHTRGISTI 97
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 328 GLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G + +GH ++ +E++ DG + S D V +WD K LH H G I S+
Sbjct: 82 GCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC-HEGPIRSL 139
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
+ L + +E H G + ++++ DG LASA +D V +W+
Sbjct: 244 LSSLCVGQEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWN 285
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 334 EKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+ E +GH G + L W+ G +L+S+ D+ V LW
Sbjct: 356 QHEFRGHTGEILDLSWSEKGFLLSSSVDET-VRLW 389
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
G V + W DG LA D+ V +WD + + + GH + S+
Sbjct: 153 GPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSL 201
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILWD 441
GH V L+W+ G LAS +D V +WD
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWD 264
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPY 447
EL GH V + + DG +ASA+ D + LW+ +
Sbjct: 367 ELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF 402
>At4g33290.1 68417.m04736 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 430
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/59 (22%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 289 NRLMVTRSMIDRLGLEKELQGHMGCVN-----CLEWNADGSVLASASDDLHVILWDPYR 450
N +++ ++D + E +G + C+ ++ +G +L DD +++W+PYR
Sbjct: 66 NLFLMSAVLMDDVDPSIEFKGKLSCLKEQVKISQVFHCEGLLLCILKDDTRIVVWNPYR 124
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPY 447
L+ H N + ++ D ++ASAS+D V LW Y
Sbjct: 346 LKYHRATCNAVSYSPDCELMASASEDATVALWKLY 380
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
+ GH V ++ + DG +A+ S D V LWD + + + H ++SV
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD-LKMRAAIQTMSNHNDQVWSV 291
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.9 bits (64), Expect = 1.0
Identities = 10/48 (20%), Positives = 30/48 (62%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
++Q H G V+ + ++ +G ++A++ + + +WD +++++ I + H
Sbjct: 276 QMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHSFH 323
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
++ + + GH + +E++ G LAS S D ++ +WD R K GH+ I
Sbjct: 87 VEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWD-IRKKGCIQTYKGHSRGI 145
Query: 496 FSV 504
++
Sbjct: 146 STI 148
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADG-SVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
+GH + + W+ ++ SA DD +++WD R Q+ + H +I
Sbjct: 215 EGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWD-LRTNQMQHQVKVHEREI 264
Score = 29.1 bits (62), Expect = 1.8
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGS-VLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
++ +++ H +N L +N VLA+AS D V L+D + ++ + H G++F V
Sbjct: 253 MQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQV 311
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADG-SVLASASDDLHVILWD 441
L H G V +EW+ + +VLAS+ +D +++WD
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPY 447
+L+GH + L+W++D LAS +D + +W+ +
Sbjct: 287 KLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQH 322
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 313 MIDRLGLEK--ELQG-HMGCVNCLEWNADGSVLASASDDLHVILWD 441
M DR EK L+G H+ + L W +G +A++ D V+LWD
Sbjct: 221 MYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWD 266
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L+GH G V L+++ +G +LAS V+ W+
Sbjct: 142 LKGHKGPVTGLDFHPNGELLASIDTTGTVLCWE 174
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
L K L GH V L+ AD S +A+ S D + LW
Sbjct: 500 LVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
L GH+ + ++++ + + SASDD + +W+ ++ + ++ TGH
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN-WQSRTCISVLTGH 134
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
L+GHM V+ + ++A ++ S S+D + +WD
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
L+GHM V+ + ++A ++ S S+D + +WD + L H
Sbjct: 244 LRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREH 290
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
L GH+ + ++++ + + SASDD + +W+ ++ + ++ TGH
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN-WQSRTCVSVLTGH 134
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNAD-GSVLASASDDLHVILWD 441
+DR + + H CV WN G V ASAS D + +WD
Sbjct: 136 MDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 376 EWNA-DGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+WN D +LA++S D V +WD Y+ + GH
Sbjct: 199 DWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGH 235
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGS-VLASASDDLHVILW 438
++ GH G V C+ + DG VL+SA + ++ +W
Sbjct: 192 QKFTGHPGVVRCVAFTEDGKYVLSSAVGERYIAVW 226
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 29.1 bits (62), Expect = 1.8
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 238 LRSGGGRERGDIDRQFQNRLMVTRSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASAS- 414
+RSGG RG + R R + ++D L + + Q ++ L W+ G LASAS
Sbjct: 182 VRSGGSALRGSLSRGSGTRWI----LVDFLRCQNDEQ-----ISALSWSPCGRYLASASY 232
Query: 415 DDLHVILWD 441
D +WD
Sbjct: 233 DSSSFTIWD 241
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L GH+ W+ DG ++ + D +WD Q + G+ G I S+
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSI 368
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
+GH G V C + + D S L + S D LWD K+L
Sbjct: 49 RGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKEL 87
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
E +GH G V + ++ G +AS S D V +W+
Sbjct: 418 EYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWE 451
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNAD--GSVLASASDDLHVILWDPYRYKQ--LHNIATGHTGDIFSV 504
L GH G V + W GS+LAS S D VILW Q ++ T H + S+
Sbjct: 52 LTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSI 109
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+LQGH V C+ WN ++LAS+ VI+W
Sbjct: 443 KLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 310 SMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
S+++ + K+L GH V +++++ +AS+S D + +W+
Sbjct: 201 SLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWE 244
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
I + G +GH VN L + DG + S +D V +WD K L + H G I
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS-HEGQI 188
Query: 496 FSV 504
S+
Sbjct: 189 QSL 191
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
I + G +GH VN L + DG + S +D V +WD K L + H G I
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS-HEGQI 188
Query: 496 FSV 504
S+
Sbjct: 189 QSL 191
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 358 GC-VNCLEWNADGSVLASASDDLHVILW 438
GC VN ++WN V+AS +D + LW
Sbjct: 43 GCAVNSVKWNHTNLVVASTGEDKKISLW 70
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADG-SVLASASDDLHVILWD 441
++L H G V LE+N + LAS +DD V +WD
Sbjct: 109 RDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWD 144
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L+GH+ W+ +G A+ + D +WD + + + G+ G + S+
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSI 368
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L+GH+ W+ +G A+ + D +WD + + + G+ G + S+
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSI 362
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPY 447
+L GH V L+W+ D LAS +D + +W+ +
Sbjct: 330 KLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQH 365
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 325 LGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNI 471
L + +E +GH + L ++ DG + S+S D + +WD KQ+ +
Sbjct: 547 LKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGV 595
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
H + + W S L +AS D + +WD K + GHTG + S+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENK-CTGVLIGHTGTVKSM 176
>At3g17620.1 68416.m02251 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 398
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPYRYKQL 462
++ DG +L + D V++W+PYR + L
Sbjct: 106 YHCDGLLLCISKDYTRVVVWNPYRSQTL 133
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
LQGH+G V + ++ + S D + +WD L TGH G +
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIGQV 215
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIF 498
L+ L GH+G V L + + + SA DD V WD + K + + GH ++
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY-HGHLHGVY 258
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 346 QGHMGCV--NCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+GH G V +CL+ NA + ASAS D LWD LH+ H
Sbjct: 58 EGHKGAVWSSCLDNNALRA--ASASADFSAKLWDALTGDVLHSFEHKH 103
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH G V+C+ + G AS S+D + +W
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 349 GHMGCVNCLEWNADGSVLASASDDLHVILW 438
GH V CL + D + L + S D V+LW
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 346 QGHMGCV--NCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+GH G V +CL+ NA + ASAS D LWD LH+ H
Sbjct: 58 EGHKGAVWSSCLDNNALRA--ASASADFSAKLWDALTGDVLHSFEHKH 103
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH G V+C+ + G AS S+D + +W
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 346 QGHMGCV--NCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGH 483
+GH G V +CL+ NA + ASAS D LWD LH+ H
Sbjct: 58 EGHKGAVWSSCLDNNALRA--ASASADFSAKLWDALTGDVLHSFEHKH 103
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH G V+C+ + G AS S+D + +W
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDI 495
L+GH W+ +G +LA+ + D LWD + + G+ G I
Sbjct: 286 LRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAI 336
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 352 HMGCVNCLEWNADGSVLASASDDLHVILWD 441
H G V L+ DG L SA D + LWD
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWD 340
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDP 444
L+GH VN +N++ L ++ D +++W P
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGSDRQILVWSP 428
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNAD--GSVLASASDDLHVILW---DPYRYKQLHNIATGHTGDIFSV 504
L GH G V + W GS+LAS S D +ILW + ++ Q H + T H + S+
Sbjct: 52 LTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAH-VFTDHKVSVNSI 109
>At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 955
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
++ DG +L A D+ V++W+PY
Sbjct: 641 YHCDGLLLCVAKDNSRVVVWNPY 663
>At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain;
Length = 925
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
++ DG +L A D+ V++W+PY
Sbjct: 611 YHCDGLLLCVAKDNSRVVVWNPY 633
>At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 949
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
++ DG +L A D+ V++W+PY
Sbjct: 635 YHCDGLLLCVAKDNSRVVVWNPY 657
>At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 905
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
++ DG +L A D+ V++W+PY
Sbjct: 591 YHCDGLLLCVAKDNSRVVVWNPY 613
>At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 925
Score = 27.9 bits (59), Expect = 4.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
++ DG +L A D+ V++W+PY
Sbjct: 611 YHCDGLLLCVAKDNSRVVVWNPY 633
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
++++ H G + ++++ DG LAS+ +D V +W
Sbjct: 215 QDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVW 248
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGSVLASASDDLHVILW 438
E +GH G V + W+ D + L SAS D V LW
Sbjct: 323 EFRGHTGEVLDISWSKD-NYLLSASMDKTVRLW 354
>At4g31980.1 68417.m04547 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 680
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 238 LRSGGGRERGDIDRQFQNRLMVTRSMIDRLGLEKEL 345
LRS R RG+ DR F N +M+T D + +E +L
Sbjct: 394 LRSHYPRLRGENDRIFGNSMMITDVCRDMILIENQL 429
>At3g49520.1 68416.m05412 F-box family protein contains weak hit to
Pfam:PF00646 F-box domain and weak hit to TIGRFAM
TIGR01640 : F-box protein interaction domain
Length = 388
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY--RYKQLHNIATGHTGDIFSV 504
++ DG +L D+ ++LW+PY + K++ T H D F++
Sbjct: 104 YHCDGLLLCIPKDNSSLMLWNPYLGQTKRIRPKNTFHRDDSFAL 147
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 358 GCVNCLEWNADGSVLASASDDLHVILWD 441
G + C+ +N GS+LA+ D ++WD
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWD 51
>At3g19890.1 68416.m02518 F-box family protein contains F-box domain
Pfam:PF00646
Length = 410
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
+ DG VL SD+ V++W+PY
Sbjct: 101 FQCDGLVLCVPSDNSSVVVWNPY 123
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 316 IDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWD 441
+ L + +E+Q H G V ++++ D LAS D + +W+
Sbjct: 391 LSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWE 432
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWD 441
V C ++ DG +LASA D V +W+
Sbjct: 511 VICCSFSYDGKLLASAGHDKKVFIWN 536
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH V+ + W+ +G ++AS S+D V LW
Sbjct: 672 KGHSSNVHSVCWSPNGELVASVSEDA-VKLW 701
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWD 441
V C ++ DG +LASA D V +W+
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWN 538
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH V+ + W+ +G ++AS S+D V LW
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDA-VKLW 703
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWD 441
V C ++ DG +LASA D V +W+
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWN 538
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH V+ + W+ +G ++AS S+D V LW
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDA-VKLW 703
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWD 441
V C ++ DG +LASA D V +W+
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWN 538
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH V+ + W+ +G ++AS S+D V LW
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDA-VKLW 703
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 364 VNCLEWNADGSVLASASDDLHVILWD 441
V C ++ DG +LASA D V +W+
Sbjct: 513 VICCSFSYDGKLLASAGHDKKVFIWN 538
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH V+ + W+ +G ++AS S+D V LW
Sbjct: 674 KGHSSNVHSVCWSPNGELVASVSEDA-VKLW 703
>At2g30730.1 68415.m03748 serine/threonine protein kinase, putative
similar to Pto kinase interactor 1 (serine/threonine
protein kinase) [Lycopersicon esculentum]
gi|3668069|gb|AAC61805; contains protein kinase domain,
Pfam:PF00069
Length = 338
Score = 27.5 bits (58), Expect = 5.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 354 VPLKLFLQPKSVDHT-PRHH*SVLELPVDVTS---LSATARPKVPFAHACSSLVPMSAVF 187
V L+L K VDHT PR S++ S + PK+ ++ S+ ++AV
Sbjct: 245 VLLELLTGRKPVDHTMPRGQQSLVTWATPKLSEDTVEECVDPKLKGEYSPKSVAKLAAVA 304
Query: 186 SICLNYHHQKIRELSTI 136
++C+ Y ++ST+
Sbjct: 305 ALCVQYESNCRPKMSTV 321
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
QGH+ V ++++ +G LAS +D +WD R ++L I H + V
Sbjct: 169 QGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD-LRMRKLLYIIPAHVNLVSQV 220
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
K L H V C ++ DG A+ D + L++ + KQ+
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 66
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
K L H V C ++ DG A+ D + L++ + KQ+
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQM 158
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 307 RSMIDRLGLEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDP 444
R ++ +G E L H V C+E++ + + S D V WDP
Sbjct: 82 RRIVFNVGKEDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWDP 127
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 331 LEKELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQL 462
++++L+GH + CL ++ +VL S+ D + LW + +L
Sbjct: 503 VKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKL 546
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDP 444
L+GH VN +N++ L ++ D +I+W P
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGADRQIIVWSP 428
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/34 (23%), Positives = 20/34 (58%)
Frame = -1
Query: 232 LRPCLFLPRTHVCCFLNMSELPSPKNSRIIYNQI 131
++ C+ L +H+ F+ + P+P N++++ I
Sbjct: 56 IKQCVILNHSHIQIFVEPNPNPNPNNAQVLQTDI 89
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 340 ELQGHMGCVNCLEWNADGS--VLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
E+ H+GCVN L + + + DD + +WD K+L GH ++S+
Sbjct: 448 EIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWD-LSGKKLFTF-EGHEAPVYSI 502
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = +1
Query: 343 LQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
L GH+ W+ DG ++ + D +WD + + G+ G I S+
Sbjct: 313 LSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSI 366
>At1g54550.1 68414.m06221 F-box family protein contains Pfam:PF00646
F-box domain; contains TIGRFAM TIGR01640 : F-box protein
interaction domain
Length = 362
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 379 WNADGSVLASASDDLHVILWDPY 447
++ DG +L A D+ V++W+PY
Sbjct: 102 YHCDGLLLCIAKDNSSVMVWNPY 124
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 337 KELQGHMGCVNCLEWNADGSVLASASDDLHVILWDPYRYKQLHNIATGHTGDIFSV 504
K + H + C+ + + S+SDD+ + LWD + I GH+ + V
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQV 148
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 346 QGHMGCVNCLEWNADGSVLASASDDLHVILW 438
+GH G V+C+ + G S S+D V +W
Sbjct: 262 KGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,810,099
Number of Sequences: 28952
Number of extensions: 212925
Number of successful extensions: 980
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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