Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0444.Seq
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 148 6e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 147 1e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 126 3e-30
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 2e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 100 2e-22
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 69 6e-13
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 65 1e-11
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 64 1e-11
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 30 0.26
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 28 1.1
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 2.4
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 27 3.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.3
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 4.3
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 26 4.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.6
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 26 5.6
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 5.6
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 25 7.5
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 25 7.5
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 7.5
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 7.5
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.9
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 9.9
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 25 9.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 148 bits (359), Expect = 6e-37
Identities = 72/85 (84%), Positives = 79/85 (92%)
Frame = +1
Query: 256 RRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKS 435
RRLRTACE+AKRTLSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+
Sbjct: 259 RRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERV 318
Query: 436 LRDAKMDKAQIHDIVLVGGSTRIPR 510
LRD+K+DKA +++IVLVGGSTRIPR
Sbjct: 319 LRDSKVDKASVNEIVLVGGSTRIPR 343
Score = 143 bits (347), Expect = 2e-35
Identities = 65/83 (78%), Positives = 75/83 (90%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYGLD+ GE NVLIF+LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+
Sbjct: 176 AAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRL 235
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
VNHF+QEFKRK KKD+ N RA+
Sbjct: 236 VNHFIQEFKRKNKKDITGNARAV 258
Score = 60.1 bits (139), Expect = 3e-10
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAV 662
P+VQKL+ DFFNGKE KSINPDE +L GD S++ QDLLLL V
Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDV 394
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 147 bits (357), Expect = 1e-36
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +1
Query: 256 RRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKS 435
RRLRTACE+AKRTLSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK
Sbjct: 259 RRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKV 318
Query: 436 LRDAKMDKAQIHDIVLVGGSTRIPR 510
LRD+K+DK+ +++IVLVGGSTRIPR
Sbjct: 319 LRDSKIDKSSVNEIVLVGGSTRIPR 343
Score = 139 bits (336), Expect = 4e-34
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYGLD+ E NVLIF+LGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+
Sbjct: 176 AAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRL 235
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
VNHF QEFKRK KKD+ N RA+
Sbjct: 236 VNHFAQEFKRKNKKDITGNARAV 258
Score = 59.7 bits (138), Expect = 4e-10
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAV 662
P++QKL+ DFFNGKE KSINPDE IL GD S++ QDLLLL V
Sbjct: 342 PRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDV 394
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 126 bits (304), Expect = 3e-30
Identities = 58/83 (69%), Positives = 69/83 (83%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYGLD K +NVLIF+LGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +
Sbjct: 180 AAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNAL 239
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
V HF+QEFKRK K D++ + RAL
Sbjct: 240 VEHFIQEFKRKQKIDISDDPRAL 262
Score = 124 bits (299), Expect = 1e-29
Identities = 56/85 (65%), Positives = 73/85 (85%)
Frame = +1
Query: 256 RRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKS 435
RRLR+ACE+AKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K
Sbjct: 263 RRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKV 322
Query: 436 LRDAKMDKAQIHDIVLVGGSTRIPR 510
L+D+K+ KA +HDIVLVGGSTRIP+
Sbjct: 323 LKDSKVPKADVHDIVLVGGSTRIPK 347
Score = 51.6 bits (118), Expect = 1e-07
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSDEVQDLLLLAV 662
P+VQ+L+ DFF+G+ LNKSINPDE +L + SD+ QDLLLL V
Sbjct: 346 PKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDV 399
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (264), Expect = 2e-25
Identities = 47/84 (55%), Positives = 70/84 (83%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYGLDK T E+++++++LGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR+
Sbjct: 209 AAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRV 267
Query: 188 VNHFVQEFKRKYKKDLATNKRALG 259
+N+ + + RK D+ + +A+G
Sbjct: 268 INYLARTYNRKNNVDVTKDLKAMG 291
Score = 102 bits (245), Expect = 4e-23
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 259 RLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 438
+L+ EKAKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L
Sbjct: 292 KLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVL 351
Query: 439 RDAKMDKAQIHDIVLVGGSTRIPR 510
+D+ + K++I DIVLVGGSTRIP+
Sbjct: 352 KDSNLKKSEIDDIVLVGGSTRIPK 375
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK-SDEVQDLLLLAVT 665
P+VQ+LL+ FF GK+ +K INPDE +L G++ SD + L ++ +T
Sbjct: 374 PKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSDNIVLLDVIPLT 427
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 100 bits (240), Expect = 2e-22
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAA+AYGLDKK + V +F+LGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +
Sbjct: 222 AAALAYGLDKKN--DAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVAL 279
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
V H V+ FK+ DL+ ++ A+
Sbjct: 280 VRHIVETFKKNEGLDLSKDRLAV 302
Score = 64.5 bits (150), Expect = 1e-11
Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Frame = +1
Query: 256 RRLRTACEKAKRTLSSYTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEP 423
+R+R A EKAK LSS ++ I + + I+RA+FE+L L R T++P
Sbjct: 303 QRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTIDP 362
Query: 424 VEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSSCKISLMER 546
+++L+DA + ++I++++LVGG TR+PR + K S+ +R
Sbjct: 363 CKRALKDANLQTSEINEVILVGGMTRMPRVVETVK-SIFKR 402
Score = 29.1 bits (62), Expect = 0.61
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 486 GWLHSYPQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAVT 665
G + P+V + ++ F +E KS+NPDE +L G V+DL+LL VT
Sbjct: 384 GGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVT 438
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 68.9 bits (161), Expect = 6e-13
Identities = 34/96 (35%), Positives = 54/96 (56%)
Frame = +1
Query: 232 PRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRS 411
PR S +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 277 PRKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNR 336
Query: 412 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRS 519
+ V +++ A M+ I +++L GG++ P+ S
Sbjct: 337 MADLVTEAVEKANMEPFDISEVILAGGASNTPKLTS 372
Score = 49.6 bits (113), Expect = 4e-07
Identities = 21/69 (30%), Positives = 42/69 (60%)
Frame = +2
Query: 50 ERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 229
++ V++ N G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K
Sbjct: 216 DKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGI 275
Query: 230 DLATNKRAL 256
D N R+L
Sbjct: 276 DPRKNARSL 284
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 64.9 bits (151), Expect = 1e-11
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGE----RNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 175
AAA+ YG+ K E R V I + G + VSI+ G F +KST D +LG +
Sbjct: 180 AAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNM 239
Query: 176 DNRMVNHFVQEFKRKYKKDLATNKRA 253
D ++++F EFK KYK D+ +N +A
Sbjct: 240 DKALIDYFAAEFKEKYKIDVLSNPKA 265
Score = 61.7 bits (143), Expect = 9e-11
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +1
Query: 259 RLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 438
RL TA E+ K+ LS+ A + ++ + ID + I R+ FEEL L P+EK+L
Sbjct: 268 RLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKAL 327
Query: 439 RDAKMDKAQIHDIVLVGGSTRIP 507
A + K ++ I +VGG TR+P
Sbjct: 328 ELAGIKKEDLYSIEMVGGCTRVP 350
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 64.5 bits (150), Expect = 1e-11
Identities = 32/88 (36%), Positives = 54/88 (61%)
Frame = +1
Query: 259 RLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 438
RL + K LS+ ++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L
Sbjct: 296 RLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKAL 355
Query: 439 RDAKMDKAQIHDIVLVGGSTRIPRCRSS 522
+ A + ++I+ I+L GG++RIP +S+
Sbjct: 356 KKANLTFSEINSIILFGGASRIPFIQST 383
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 30.3 bits (65), Expect = 0.26
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 41 GTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 220
GT +N+ FNL +F ++ +E+G +V+S + +LG +R ++ R
Sbjct: 311 GTAFKNLWNFNLLDASFGWTVFVVENGHVQVESKSHGFNLGYRRMASRRNENYASHIPRS 370
Query: 221 YKKDLAT 241
++ T
Sbjct: 371 TSENTGT 377
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 177 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVP 82
+KSSP K VSP V SK +S V + S +P
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIP 234
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 277 EKAKRTLSSYTQASIEIDSLFE 342
E+A+RT ++YTQ S E++ E
Sbjct: 1107 EEARRTRNAYTQKSGEVECFME 1128
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 178 QSHGQPLCPGVQEEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLF 339
QS G PL PG + GP + SS TA E S +I I+ F
Sbjct: 599 QSIGDPLPPGAMANVSAGPSSVRSSSYN-STASESKSEITSHQNLHTIPINKPF 651
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +2
Query: 29 LDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 199
LDK G+ I + GG T SIL +GI VK E F+N F
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYETFNNERAIKF 104
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 474 YCTGGWLHSYPQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLL 653
Y G +H Y ++ LL++++N ++L IN E L + D+V ++
Sbjct: 924 YKDGLKVHEYNVIKGLLEEYYNVEKLFSGINKREEDVILR------LRDENKDDVDKVIA 977
Query: 654 LAVT 665
LA++
Sbjct: 978 LALS 981
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 472 RGFEPYPSWHHGETSPLAP 416
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 213 LNSWTKWLTMRLSKSSPPKWVSPAVDF 133
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 4.3
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 614 QDSSLDSCTISYG-LVRVNRFVELLSIKEILQELLHLGIRVEPPTSTISWI 465
+D++L + TIS LV+ F E + IL + + G V PP +T+S+I
Sbjct: 329 KDAALVASTISNSALVKTAFFGEDANWGRILCAVGYSGAAVNPPATTVSFI 379
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -1
Query: 177 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRLKISTFRSPVPFLS 31
+ S PP P + IP PPPR ST R P P S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSS 381
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1
Query: 279 LTCSTQTP--RALLLVARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTS 127
L + Q+P AL+ VAR F + LLN+ + T+R+ + V + FTS
Sbjct: 715 LIYNAQSPDEEALVKVARDFGFTLLNTKNRRYTIRIRGENKNFRVLDIIPFTS 767
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 331 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 489
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 25.4 bits (53), Expect = 7.5
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -3
Query: 355 RSQYPQRENLSQCSL--VCTMIRSSLPSHMQYANA*SSLVGSEVLFVFPLELLDKVVDHA 182
R Q P +L ++ +C ++S+L + YA ++ ++ ++FPL VVD A
Sbjct: 416 RLQMPSIVDLGTVNIQALCMSLQSTLEKEITYAMNVLLILTNDQKWMFPLSECQDVVD-A 474
Query: 181 IVKVLT 164
++ V T
Sbjct: 475 LIDVAT 480
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 7.5
Identities = 26/104 (25%), Positives = 42/104 (40%)
Frame = +1
Query: 208 VQEEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEE 387
+ + I K P Y SSR +A + T S++ + E S TS + +
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTRSAFRPKTSETVSSEVVSSPPTSPLHSPVKP 365
Query: 388 LNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRS 519
++ + E VE S+ + +A+ VL G S R P S
Sbjct: 366 VSNEQVEQVTE-VELSIPVPSIQEAESQKPVLTGSSMRRPSVTS 408
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 398 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 487
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 81 AVPSTCPSLPSRMVSSR*NPPPATPTW 161
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 240 VARSFLYFLLNSWTKWLTMRLSKS 169
V + ++ FL SW KWL + + +S
Sbjct: 137 VEQKWIQFLHKSWMKWLHISIQES 160
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 86 TFDVSILTIEDGIFEVKSTAGDTHL 160
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/64 (20%), Positives = 29/64 (45%)
Frame = +1
Query: 214 EEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELN 393
+E + + S R +K ++ + + S++ SL++ + TSI + +
Sbjct: 96 DEESSSQKSNSKESHAQRKKLQKERKAMKPFADTSLKAKSLWDKLRQKTSIKAEERKTII 155
Query: 394 ADLF 405
A+LF
Sbjct: 156 AELF 159
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,859,460
Number of Sequences: 5004
Number of extensions: 61279
Number of successful extensions: 269
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -