Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0444.Seq
(669 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 149 3e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 146 1e-35
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 114 5e-26
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 75 5e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 56 3e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 55 6e-08
SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 31 0.85
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_29286| Best HMM Match : Avirulence (HMM E-Value=2.3) 31 1.1
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.6
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.6
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 29 4.5
SB_52369| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.18) 28 6.0
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 28 6.0
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 7.9
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 7.9
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 28 7.9
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 28 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 149 bits (360), Expect = 3e-36
Identities = 68/83 (81%), Positives = 78/83 (93%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYGLDKK ERNVLI++LGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+M
Sbjct: 178 AAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKM 237
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
V+HFV++FK+KYKKD+ NKRA+
Sbjct: 238 VDHFVKQFKQKYKKDITPNKRAM 260
Score = 142 bits (345), Expect = 2e-34
Identities = 71/102 (69%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Frame = +1
Query: 211 QEEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEEL 390
+++ +K + + RRLRTACE+AKRTLSS TQASIEIDSLFEGIDFYTSITRARFEEL
Sbjct: 246 KQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 305
Query: 391 NADLFRSTMEPVEKSLRDAKM--DKAQIHDIVLVGGSTRIPR 510
N DLF+ T EPVE+++RD+K+ K IHDIVLVGGSTRIP+
Sbjct: 306 NQDLFKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPK 347
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAV 662
P++QK+LQ+ F GKELNKSINPDE ILHGDK D V+DLLLL V
Sbjct: 346 PKIQKMLQELFGGKELNKSINPDEAVAYGAAVQAAILHGDKDDTVKDLLLLDV 398
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 146 bits (355), Expect = 1e-35
Identities = 68/84 (80%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNR 184
AAA+AYGLDK +GE+NVLIF+LGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR
Sbjct: 178 AAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNR 237
Query: 185 MVNHFVQEFKRKYKKDLATNKRAL 256
+VNHFV EFKRKYKKD++ N RA+
Sbjct: 238 LVNHFVAEFKRKYKKDMSKNSRAM 261
Score = 134 bits (323), Expect = 8e-32
Identities = 62/100 (62%), Positives = 80/100 (80%)
Frame = +1
Query: 211 QEEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEEL 390
+ + +K + RRLRTACE+AKRTLSS T+ASIE+DSLFEGIDFYT I+RARFE+L
Sbjct: 247 KRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDL 306
Query: 391 NADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 510
+DLF S ++PV K+L DAK K+ IH++VLVGGSTR+P+
Sbjct: 307 CSDLFLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPK 346
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAV 662
P++QK+L+++F+GK LNKSINPDE IL GDKSDEV+D+LL+ V
Sbjct: 345 PKIQKMLEEYFSGKSLNKSINPDEAVAYGAAVQAAILSGDKSDEVKDVLLVDV 397
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 142 bits (345), Expect = 2e-34
Identities = 67/83 (80%), Positives = 75/83 (90%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYGLDKK ERNVLIF+LGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN M
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNM 330
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
V+ FV++FK+KYKKD+ NKRAL
Sbjct: 331 VDFFVKQFKQKYKKDITPNKRAL 353
Score = 138 bits (334), Expect = 4e-33
Identities = 66/104 (63%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
Frame = +1
Query: 211 QEEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEEL 390
+++ +K + + RRLRTACE+AKRTLSS TQASIEIDSL++GIDFYTSITRARFEE+
Sbjct: 339 KQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEM 398
Query: 391 NADLFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPRCRS 519
NA LF+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIP+ +S
Sbjct: 399 NAHLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQS 442
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/53 (64%), Positives = 38/53 (71%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAV 662
P++Q LLQ+FFNGKELNKSINPDE ILHGDKS+ QDLLLL V
Sbjct: 438 PKIQSLLQNFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEATQDLLLLDV 490
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 114 bits (275), Expect = 5e-26
Identities = 50/83 (60%), Positives = 70/83 (84%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAAIAYG+DKK GE+N+L+F+LGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD +
Sbjct: 876 AAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNV 934
Query: 188 VNHFVQEFKRKYKKDLATNKRAL 256
+ HF++ +K+K K++ + RA+
Sbjct: 935 MEHFIKLYKKKKGKNIRKDNRAV 957
Score = 114 bits (274), Expect = 7e-26
Identities = 56/101 (55%), Positives = 73/101 (72%)
Frame = +1
Query: 226 KGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLF 405
K R + ++LR EKAKR LS+ QA +EI+S FEG DF +TRARFEELNA LF
Sbjct: 948 KNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLF 1007
Query: 406 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSSCK 528
+ST++PV+K L DA + K++IH+IVLVGGSTRIP+ + K
Sbjct: 1008 KSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVK 1048
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEVQDLLLLAV 662
P+VQ+L++DFF GKE ++ INPDE +L G+ ++ +++LL V
Sbjct: 1041 PKVQQLVKDFFEGKEPSRGINPDEAVAYGAAVQAGVLGGE--EDTGEVVLLDV 1091
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/66 (53%), Positives = 51/66 (77%)
Frame = +2
Query: 59 VLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 238
+ +++LGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 239 TNKRAL 256
+ AL
Sbjct: 62 KDSMAL 67
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Frame = +1
Query: 256 RRLRTACEKAKRTLSSYTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEP 423
+RLR A EKAK LSS Q I + + ++R++FE L ADL T+ P
Sbjct: 68 QRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLINRTVGP 127
Query: 424 VEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSS 522
+K L+DA+++K +I D++LVGG TR+P+ + +
Sbjct: 128 CKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQT 160
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 74.9 bits (176), Expect = 5e-14
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 187
AAA+AYGL KK G NV++ +LGGGT DVS+L I+ G+F + AG+ LGG+DF+ R
Sbjct: 208 AAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARF 266
Query: 188 VNHFVQEFKRKYKKDLATNK 247
+ + +Q +++ + L ++
Sbjct: 267 MQYLLQLIHKRFNRQLTCSE 286
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Frame = +1
Query: 247 ESSRRLRTACEKAKRTLSSYTQASIEI--DSLFEG---IDFYTSITRARFEELNADLFRS 411
E +RLR E AK L+ + +I++ SL EG + F +I+R FE +N DLF+
Sbjct: 286 EDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKK 345
Query: 412 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCR 516
++P+ + L + ++ K ++ ++VLVGGSTR+P+ R
Sbjct: 346 VLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIR 380
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/23 (43%), Positives = 20/23 (86%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPD 572
P++++L+Q+FF+GK N +I+P+
Sbjct: 377 PKIRQLIQEFFDGKPPNVAIDPE 399
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGE---RNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFD 178
A ++AYG+ K+ RNV+ ++G + V I G +V STA + +LGG DFD
Sbjct: 235 AVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFD 294
Query: 179 NRMVNHFVQEFKRKYKKDLATNKRA 253
+V HF QEFK KYK D+ ++ +A
Sbjct: 295 YVLVEHFAQEFKTKYKIDVHSSIKA 319
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 259 RLRTACEKAKRTLSSYT-QASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKS 435
+L CEK K+ +S+ T + I I+ E D + + RA+FEEL ADL + P+ +
Sbjct: 322 KLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSA 381
Query: 436 LRDAKMDKAQIHDIV 480
L A+ K + ++V
Sbjct: 382 L--AQSGKYSVKNVV 394
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +1
Query: 280 KAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 459
+ K+ LS+ + +I+ +F+G DF +TR EE+ DLF PV ++L+ A M
Sbjct: 253 RVKQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTM 312
Query: 460 AQIHDIVLVGGSTRIPRCRSS 522
I +VLVGG R+P+ + +
Sbjct: 313 NDIDSVVLVGGGIRVPKVQDA 333
Score = 33.1 bits (72), Expect = 0.21
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Frame = +2
Query: 8 AAAIAYGLDKK----GTGERNVLIFNLGGGTFDVSIL------TIEDGIFE------VKS 139
A A+ YGL ++ T E++ + +++G + +I+ T + GI E +K
Sbjct: 144 AVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKG 203
Query: 140 TAGDTHLGGEDFDNRMVNHFVQEFKRKYK 226
D LGG D R+ +H VQ FK+ YK
Sbjct: 204 IGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/53 (43%), Positives = 40/53 (75%)
Frame = +1
Query: 364 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSS 522
++R++FE L ADL T+ P +K L+DA+++K +I D++LVGG TR+P+ + +
Sbjct: 53 LSRSKFESLVADLINRTVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQT 105
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +2
Query: 50 ERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 217
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 218 -KYKKDLATNKRA 253
K+K D TNKR+
Sbjct: 213 WKWKIDPLTNKRS 225
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 232 PRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITR 372
P + S +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 219 PLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 504 PQVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSDEV 638
P++Q+LL+++F GKE+ + I+PDE IL G K ++
Sbjct: 53 PKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKEADM 97
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = -1
Query: 240 VARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRLKIS 61
V R+ + N+ +L +L P KW P D +S P V + + PP S
Sbjct: 336 VGRALGFERFNALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGS 394
Query: 60 TFRSPVPFLSRP 25
+ PF+S+P
Sbjct: 395 AKPATQPFVSQP 406
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 8 AAAIAYGLDKKGTGERNVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 175
A A L +G E + + G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 56 NVLIFNLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 175
+ LI + G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
>SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 209 FKRKYKKDLATNKRALGVCVLHV-RRQRGPYHRTHKRALR*ILSLRVLTSTRQLL 370
FKR +++L + + LG CV+ V RR + P H+RA R L TST ++
Sbjct: 47 FKRSIRRNLTYHCKELGKCVVDVARRNQCPASVQHERAPRSAQILPRATSTTTIV 101
>SB_29286| Best HMM Match : Avirulence (HMM E-Value=2.3)
Length = 662
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Frame = +1
Query: 247 ESSRRLRTACEKAKRTLSSYT--------QASIEIDSLFEGIDFYTSITRARFEELNADL 402
E S RL K+TL SY+ + S+ D++ + Y+SI R +L+
Sbjct: 151 ELSLRLSKCRISIKQTLLSYSSIVGYRFNELSLLSDAIKRTLLSYSSIVGYRLNKLSLRF 210
Query: 403 FRSTMEPV-EKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSSCKISLM 540
F+ M P+ E SLR K + ++++ S R+ +CR S K +L+
Sbjct: 211 FKCRMSPLNELSLRLFKCRMSPLNEL-----SLRLFKCRVSIKQTLL 252
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 69 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 212
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 138 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 254
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 72 TSAAVPSTCPSLPSRMVSSR*NPPPATP 155
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +2
Query: 59 VLIFNLGGGTFDVSILTIEDGIFEVK 136
V I++LG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_52369| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.18)
Length = 308
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/87 (20%), Positives = 39/87 (44%)
Frame = +1
Query: 208 VQEEIQKGPRYQQESSRRLRTACEKAKRTLSSYTQASIEIDSLFEGIDFYTSITRARFEE 387
+ + + + QQ++ +R R+A + SSY Q +E+ + +GI + EE
Sbjct: 16 LNQNTDRNRKLQQQNRKRRRSASKVVYEKHSSYEQG-LELQRVHQGIWQRVLFDKVECEE 74
Query: 388 LNADLFRSTMEPVEKSLRDAKMDKAQI 468
+ + +E +D +D+A +
Sbjct: 75 IEEKINDVVVEADRGVYKDRTVDRAPL 101
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 325 IDSLFEGIDFYTSITRARFEELNAD--LFRSTMEPVEKSLRD 444
+DSL +DF T+ T A F +LN R T+ + SL +
Sbjct: 168 LDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLSQINSSLSE 209
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -1
Query: 240 VARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRLKIS 61
V R+ + N+ + +L P KW D T I +V PPPR +
Sbjct: 543 VGRALGFERFNALGFYFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTA 602
Query: 60 TFRSPVPFLSRP 25
+ +PF+S+P
Sbjct: 603 KL-ATLPFVSQP 613
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +3
Query: 90 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 254
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 65 IFNLGGGTFDVSILTIEDGIFEV 133
+F+LG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 156 WVSPAVDFTSKIPSSMVRMDTSKVPPPRLKISTFRSPVP 40
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,409,371
Number of Sequences: 59808
Number of extensions: 491297
Number of successful extensions: 4068
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4056
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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