Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0443.Seq
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   3.5  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    24   6.1  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   8.1  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 103 YHRQSWKLWFLSGNIDSSKLNRVHVYCLQR*FIGR 207
           +HR   +LWF +  ID+ + N   +Y   R +  R
Sbjct: 137 HHRGGHRLWFDTAEIDAERDNNQLLYASLRMYKNR 171


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 153 TVNVAGEKPKFPRLSVIVSTFP 88
           T+NV    P FP  +VI+  +P
Sbjct: 78  TLNVVDLSPPFPNTNVILKPYP 99


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 372 ASRCDIDSWKLNC 334
           A RCD+D+ K NC
Sbjct: 21  AGRCDLDNNKTNC 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,128
Number of Sequences: 2352
Number of extensions: 14500
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)