Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0441.Seq
         (781 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   132   2e-33
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   132   2e-33
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    94   1e-21
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.17 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.1  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  132 bits (320), Expect = 2e-33
 Identities = 61/86 (70%), Positives = 77/86 (89%)
 Frame = +1

Query: 1   RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
           RLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L
Sbjct: 90  RLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVL 149

Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
           +DAK+ K+ +H+IVLVGGSTRIPKV+
Sbjct: 150 QDAKIGKSAVHEIVLVGGSTRIPKVQ 175



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +3

Query: 246 PQGQKLLQDFFNGKELNKSINPDE 317
           P+ Q+L+ ++FNGKE  +SINPDE
Sbjct: 172 PKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  132 bits (320), Expect = 2e-33
 Identities = 61/86 (70%), Positives = 77/86 (89%)
 Frame = +1

Query: 1   RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
           RLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L
Sbjct: 90  RLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVL 149

Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
           +DAK+ K+ +H+IVLVGGSTRIPKV+
Sbjct: 150 QDAKIGKSAVHEIVLVGGSTRIPKVQ 175



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 14/24 (58%), Positives = 20/24 (83%)
 Frame = +3

Query: 246 PQGQKLLQDFFNGKELNKSINPDE 317
           P+ Q+L+ ++FNGKE  +SINPDE
Sbjct: 172 PKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 94.3 bits (224), Expect = 1e-21
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = +1

Query: 1   RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
           +LR   E+AKR LSS  + ++ I++L    DF  ++TRA+FEELN D F  T++PV+K L
Sbjct: 89  KLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVL 148

Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVRSSCK 270
            DA M K QI +IVLVGGSTRIPK++   K
Sbjct: 149 EDADMTKDQIDEIVLVGGSTRIPKIQQLIK 178



 Score = 41.1 bits (92), Expect = 1e-05
 Identities = 16/24 (66%), Positives = 22/24 (91%)
 Frame = +3

Query: 246 PQGQKLLQDFFNGKELNKSINPDE 317
           P+ Q+L++DFF+GKELN+ INPDE
Sbjct: 171 PKIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 211 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 110
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +2

Query: 590 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTNK 706
           +   G+  A   V  I+   D+D NG  N + ++K+  K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKKTHPK 94


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 261 LLQDFFNGKELNKSINPDE 317
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 226 PVQYRGFEPYPSWHHGETSPLAP 158
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,493
Number of Sequences: 336
Number of extensions: 3666
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)