Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0441.Seq
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 151 1e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 149 3e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 126 3e-30
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 126 4e-30
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 103 4e-23
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 69 1e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 68 1e-12
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 65 9e-12
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.0
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 5.3
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 7.0
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 25 9.2
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 9.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 151 bits (365), Expect = 1e-37
Identities = 73/86 (84%), Positives = 81/86 (94%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
RLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ L
Sbjct: 260 RLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVL 319
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
RD+K+DKA +++IVLVGGSTRIP+V+
Sbjct: 320 RDSKVDKASVNEIVLVGGSTRIPRVQ 345
Score = 150 bits (364), Expect = 2e-37
Identities = 73/88 (82%), Positives = 77/88 (87%)
Frame = +2
Query: 509 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 688
SDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+
Sbjct: 430 SDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSAL 489
Query: 689 EKSTNKENKITITNDKGRLFQGRDRRMV 772
EK T K KITITNDKGRL + RMV
Sbjct: 490 EKGTGKTQKITITNDKGRLSKEEIDRMV 517
Score = 76.2 bits (179), Expect = 5e-15
Identities = 40/74 (54%), Positives = 44/74 (59%)
Frame = +3
Query: 246 PQGQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 425
P+ QKL+ DFFNGKE KSINPDE +L GD SE+ QD GI
Sbjct: 342 PRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGI 401
Query: 426 ETAGGVMTTLIKRN 467
ETAGGVMT LIKRN
Sbjct: 402 ETAGGVMTPLIKRN 415
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 149 bits (362), Expect = 3e-37
Identities = 71/86 (82%), Positives = 82/86 (95%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
RLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK L
Sbjct: 260 RLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVL 319
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
RD+K+DK+ +++IVLVGGSTRIP+++
Sbjct: 320 RDSKIDKSSVNEIVLVGGSTRIPRIQ 345
Score = 149 bits (361), Expect = 4e-37
Identities = 72/88 (81%), Positives = 77/88 (87%)
Frame = +2
Query: 509 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 688
+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+
Sbjct: 430 ADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSAL 489
Query: 689 EKSTNKENKITITNDKGRLFQGRDRRMV 772
EK T K KITITNDKGRL + RMV
Sbjct: 490 EKGTGKTQKITITNDKGRLSKEEIDRMV 517
Score = 75.8 bits (178), Expect = 7e-15
Identities = 41/74 (55%), Positives = 44/74 (59%)
Frame = +3
Query: 246 PQGQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 425
P+ QKL+ DFFNGKE KSINPDE IL GD SE+ QD GI
Sbjct: 342 PRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGI 401
Query: 426 ETAGGVMTTLIKRN 467
ETAGGVMT LIKRN
Sbjct: 402 ETAGGVMTPLIKRN 415
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 126 bits (305), Expect = 3e-30
Identities = 61/88 (69%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +2
Query: 512 DNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIE 691
DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++
Sbjct: 460 DNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVD 519
Query: 692 KS-TNKENKITITNDKGRLFQGRDRRMV 772
KS K K+ I NDKGRL + RMV
Sbjct: 520 KSGKGKPEKLVIKNDKGRLSEEDIERMV 547
Score = 105 bits (251), Expect = 9e-24
Identities = 48/86 (55%), Positives = 67/86 (77%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
+L+ E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L
Sbjct: 292 KLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVL 351
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
+D+ + K++I DIVLVGGSTRIPKV+
Sbjct: 352 KDSNLKKSEIDDIVLVGGSTRIPKVQ 377
Score = 49.2 bits (112), Expect = 7e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +3
Query: 246 PQGQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 425
P+ Q+LL+ FF GK+ +K INPDE +L G++ + + GI
Sbjct: 374 PKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGI 430
Query: 426 ETAGGVMTTLIKRN 467
ET GGVMT LI RN
Sbjct: 431 ETTGGVMTKLIGRN 444
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 126 bits (304), Expect = 4e-30
Identities = 58/86 (67%), Positives = 74/86 (86%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
RLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L
Sbjct: 264 RLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVL 323
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
+D+K+ KA +HDIVLVGGSTRIPKV+
Sbjct: 324 KDSKVPKADVHDIVLVGGSTRIPKVQ 349
Score = 93.1 bits (221), Expect = 4e-20
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = +2
Query: 506 LSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSA 685
++DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A
Sbjct: 434 VADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTA 493
Query: 686 IEKSTNKENKITITNDKGRLFQGRDRRMV 772
+EK+T + I ITN G L + + M+
Sbjct: 494 VEKTTGRSAHIEITNSVGHLSSTKIQEMI 522
Score = 45.2 bits (102), Expect = 1e-05
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 246 PQGQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGDKSEEVQDXXXXXXXXXXXG 422
P+ Q+L+ DFF+G+ LNKSINPDE +L + S++ QD G
Sbjct: 346 PKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLG 405
Query: 423 IETAGGVMTTLIKRN 467
+ G V + RN
Sbjct: 406 VAMEGNVFGVVCPRN 420
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 103 bits (246), Expect = 4e-23
Identities = 44/77 (57%), Positives = 61/77 (79%)
Frame = +2
Query: 509 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 688
+D Q V I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA
Sbjct: 473 ADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSAR 532
Query: 689 EKSTNKENKITITNDKG 739
+K+TNK++ IT+ G
Sbjct: 533 DKATNKDSSITVAGSSG 549
Score = 63.3 bits (147), Expect = 4e-11
Identities = 35/100 (35%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPV 168
R+R A E+AK LSS ++ I + + I+RA+FE+L L R T++P
Sbjct: 304 RIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTIDPC 363
Query: 169 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVRSSCKISLMER 288
+++L+DA + ++I++++LVGG TR+P+V + K S+ +R
Sbjct: 364 KRALKDANLQTSEINEVILVGGMTRMPRVVETVK-SIFKR 402
Score = 37.1 bits (82), Expect = 0.003
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +3
Query: 228 GWLHSYPQGQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXX 407
G + P+ + ++ F +E KS+NPDE +L G V+D
Sbjct: 384 GGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVT 438
Query: 408 XXXXGIETAGGVMTTLIKRN 467
GIET GGV T LI RN
Sbjct: 439 PLSLGIETLGGVFTRLINRN 458
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 68.5 bits (160), Expect = 1e-12
Identities = 33/88 (37%), Positives = 56/88 (63%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
RL R K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L
Sbjct: 296 RLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKAL 355
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVRSS 264
+ A + ++I+ I+L GG++RIP ++S+
Sbjct: 356 KKANLTFSEINSIILFGGASRIPFIQST 383
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 68.1 bits (159), Expect = 1e-12
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
+LR CE KR LS+ T AS +DSL +GIDF++SI R R++ + + V +++
Sbjct: 286 KLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAV 345
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVRS 261
A M+ I +++L GG++ PK+ S
Sbjct: 346 EKANMEPFDISEVILAGGASNTPKLTS 372
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 65.3 bits (152), Expect = 9e-12
Identities = 33/86 (38%), Positives = 50/86 (58%)
Frame = +1
Query: 1 RLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSL 180
RL TA ER K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L
Sbjct: 268 RLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKAL 327
Query: 181 RDAKMDKAQIHDIVLVGGSTRIPKVR 258
A + K ++ I +VGG TR+P V+
Sbjct: 328 ELAGIKKEDLYSIEMVGGCTRVPIVK 353
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -2
Query: 681 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 544
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 214 RGFEPYPSWHHGETSPLAP 158
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 73 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 231
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 9.2
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = -2
Query: 696 DFSIAETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPSNTWMSTPGW 517
+ S L IP+AS K S T G G S + P L++ + R+ S +
Sbjct: 479 NLSRRNNLAIPIASRRKSVSAVNTLYGVGSSYTSESFPFSKLTVPVERNSFRETESPKPF 538
Query: 516 LS 511
LS
Sbjct: 539 LS 540
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 140 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 229
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,080,275
Number of Sequences: 5004
Number of extensions: 60959
Number of successful extensions: 230
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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