Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0437.Seq
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical ...    28   5.8  
AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical...    28   5.8  
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 547  VTTGITGL----WQPSVIATLLFDPSMSALPIIAKQNSPSV 437
            VTTG++ L    W P+  A    DP+ S  P+ A+  S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 547  VTTGITGL----WQPSVIATLLFDPSMSALPIIAKQNSPSV 437
            VTTG++ L    W P+  A    DP+ S  P+ A+  S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
            R11A8.7d protein.
          Length = 1427

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 547  VTTGITGL----WQPSVIATLLFDPSMSALPIIAKQNSPSV 437
            VTTG++ L    W P+  A    DP+ S  P+ A+  S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
            R11A8.7c protein.
          Length = 1405

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 547  VTTGITGL----WQPSVIATLLFDPSMSALPIIAKQNSPSV 437
            VTTG++ L    W P+  A    DP+ S  P+ A+  S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 547  VTTGITGL----WQPSVIATLLFDPSMSALPIIAKQNSPSV 437
            VTTG++ L    W P+  A    DP+ S  P+ A+  S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 547  VTTGITGL----WQPSVIATLLFDPSMSALPIIAKQNSPSV 437
            VTTG++ L    W P+  A    DP+ S  P+ A+  S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317


>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 288 RPSGRWCEATIPGLCLNASKAEAS 217
           RPSG WC     GL L  ++ EAS
Sbjct: 35  RPSGPWCVKLFVGLYLQGNRNEAS 58


>AL132902-6|CAC14421.1|  316|Caenorhabditis elegans Hypothetical
           protein Y71A12B.6 protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -1

Query: 309 RTFGSCTRPSGRWCEATIPG-LCLNASKAEASLAES-GKDMLT-VEPRESGG 163
           + F   TRP G+WC   +P   C+   +  +   +S G  +L+ VE  E  G
Sbjct: 144 KNFTMVTRPKGQWCIGVVPAKACITQKQGSSMCTKSYGNSILSGVENFEEYG 195


>AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical
           protein Y25C1A.4 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
 Frame = -1

Query: 288 RPSGRWCEATIPGLCLNASKAEASLAESGKDMLT-VEPRESGGSKQCDFTSRVSHSKRET 112
           RPSG WC    PG       AE +   +G   LT ++ +      QC++ +    S    
Sbjct: 162 RPSGGWCIKVFPGYFALKEHAENACQANGAATLTGLQNKAEALFIQCEYRNSPYFSCFSC 221

Query: 111 RRRSPFGSRRSMLSVFF 61
            + S  G   S + V +
Sbjct: 222 FQNSVLGYCSSTVEVLY 238


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 545 YHRDNWLVAAKRYSDVAF*SFDVGSSYHCE-AKFAKRWIVHPSKGNVSWV 399
           YH++N+ VAA RY    F   ++ +S  C+  +   + +V+P   N +W+
Sbjct: 267 YHKENYNVAATRYGS-KFSLKNMFNSMECQNNRETGKIVVNPKHLNFTWI 315


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -2

Query: 545 YHRDNWLVAAKRYSDVAF*SFDVGSSYHCE-AKFAKRWIVHPSKGNVSWV 399
           YH++N+ VAA RY    F   ++ +S  C+  +   + +V+P   N +W+
Sbjct: 294 YHKENYNVAATRYGS-KFSLKNMFNSMECQNNRETGKIVVNPKHLNFTWI 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,394,504
Number of Sequences: 27780
Number of extensions: 338555
Number of successful extensions: 973
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)