Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0436.Seq
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 110 7e-25
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 109 2e-24
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 105 3e-23
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 100 2e-21
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 97 1e-20
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 93 2e-19
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 93 2e-19
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 93 2e-19
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 92 3e-19
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 92 3e-19
At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR... 31 0.96
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 29 2.2
At1g58220.1 68414.m06612 myb family transcription factor contain... 29 2.2
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 2.9
At1g56080.1 68414.m06439 expressed protein 29 3.9
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 29 3.9
At1g17380.1 68414.m02120 expressed protein 29 3.9
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 28 5.1
At2g43970.2 68415.m05468 La domain-containing protein contains P... 28 5.1
At2g43970.1 68415.m05467 La domain-containing protein contains P... 28 5.1
At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin; g... 28 6.8
At5g01280.1 68418.m00037 expressed protein 28 6.8
At5g45400.1 68418.m05579 replication protein, putative similar t... 27 8.9
At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR... 27 8.9
At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR... 27 8.9
At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR... 27 8.9
At3g60730.1 68416.m06794 pectinesterase family protein contains ... 27 8.9
At2g45160.1 68415.m05622 scarecrow transcription factor family p... 27 8.9
At1g35614.1 68414.m04423 hypothetical protein 27 8.9
At1g11760.1 68414.m01349 expressed protein weak similarity to Pf... 27 8.9
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 110 bits (265), Expect = 7e-25
Identities = 53/86 (61%), Positives = 59/86 (68%)
Frame = +1
Query: 283 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 462
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKGVV L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTTDGKPFVELLMENGVIPGIKVDKGVVDLAGTNGETTTQGLDSLGA 128
Query: 463 RCAQYKKDGCHFAKWLAC*RSAATPP 540
RC +Y K G FAKW A + AT P
Sbjct: 129 RCQEYYKAGARFAKWRAVLKIGATEP 154
Score = 74.1 bits (174), Expect = 8e-14
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = +3
Query: 513 VLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
VLKIG PS +IQENA LARYA ICQ +VPIVEPEVL DG HD+ + VTE
Sbjct: 146 VLKIGATEPSELSIQENAKGLARYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTE 202
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
+EL K A+ I P KGILAADESTGT+GKR I VEN E NR+ R+LL
Sbjct: 10 DELIKTAKYIATPGKGILAADESTGTIGKRFASINVENIESNRQALRELL 59
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 109 bits (261), Expect = 2e-24
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +1
Query: 283 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 462
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKG+V L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGA 128
Query: 463 RCAQYKKDGCHFAKWLAC*RSAATPP 540
RC QY + G FAKW A + AT P
Sbjct: 129 RCQQYYEAGARFAKWRAFFKIGATEP 154
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = +3
Query: 519 KIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
KIG PS +IQE+A VLARYA ICQ +VPIVEPEVL G HD+ + VTE
Sbjct: 148 KIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTE 202
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = +2
Query: 101 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
++EL K A+ I P +GILAADEST T+GKR I VENTE NR+ YR+LL
Sbjct: 9 EDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELL 59
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 105 bits (252), Expect = 3e-23
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +1
Query: 283 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 462
+SGVILF ETLYQK+ DGTP V +L+ G++PGIKVDKG V L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKSSDGTPFVDMLKSAGVLPGIKVDKGTVELAGTNGETTTQGLDGLGD 128
Query: 463 RCAQYKKDGCHFAKWLAC*RSAATPP 540
RC +Y + G FAKW A + P
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGVNEP 154
Score = 74.1 bits (174), Expect = 8e-14
Identities = 36/57 (63%), Positives = 40/57 (70%)
Frame = +3
Query: 513 VLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
VLKIG N PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+ + VTE
Sbjct: 146 VLKIGVNEPSQLAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIQKCAAVTE 202
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +2
Query: 89 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LL
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVESNRRALRELL 59
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = +1
Query: 283 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 462
+SGVILF ETLYQK+ DG V +L++ G++PGIKVDKG V L G++ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKSSDGKLFVDILKEGGVLPGIKVDKGTVELAGTDGETTTQGLDGLGD 128
Query: 463 RCAQYKKDGCHFAKWLA 513
RC +Y + G FAKW A
Sbjct: 129 RCKKYYEAGARFAKWRA 145
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +3
Query: 513 VLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
VLKIG N PS +I ENA LARYA ICQ +VPIVEPE+L DG HD+ + VTE
Sbjct: 146 VLKIGENEPSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIQKCAAVTE 202
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +2
Query: 89 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LL
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRNLRELL 59
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/79 (58%), Positives = 54/79 (68%)
Frame = +1
Query: 271 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 450
L + ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS DE QGLD
Sbjct: 109 LGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLD 168
Query: 451 DLAQRCAQYKKDGCHFAKW 507
LA R A Y + G FAKW
Sbjct: 169 GLASRTAAYYQQGARFAKW 187
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
+EL K A+ I +P GI+A DES T GKRL IG+ENTE NR+ YR LL
Sbjct: 54 DELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLL 103
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +3
Query: 531 NTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
N PS A++E A LARYA+I Q +VPIVEPE++ DGEH +DR V E
Sbjct: 195 NGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAE 245
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/79 (56%), Positives = 50/79 (63%)
Frame = +1
Query: 271 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 450
L + ISG ILF ETLYQ DG V L I+PGIKVDKG+ PL GS +E QGLD
Sbjct: 101 LGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLD 160
Query: 451 DLAQRCAQYKKDGCHFAKW 507
LA R A+Y K G FAKW
Sbjct: 161 GLASRSAEYYKQGARFAKW 179
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
+EL K A++I +P +GILA DES T GKRL IG++NTE+NR+ YRQLL
Sbjct: 46 DELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLL 95
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 537 PSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
PS A++E A LARYA+I Q +VPIVEPE+L DG+H ++R +V E
Sbjct: 189 PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAE 237
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +1
Query: 271 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 450
L + +SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 108 LGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLD 167
Query: 451 DLAQRCAQYKKDGCHFAKW 507
L+ R A Y + G FAKW
Sbjct: 168 GLSSRTAAYYQQGARFAKW 186
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLL 102
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +3
Query: 531 NTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
N PS A++E A LARYA+I Q +VPIVEPE+L DGEHD+DR V E
Sbjct: 194 NGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAE 244
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 92.7 bits (220), Expect = 2e-19
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +1
Query: 271 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 450
L + +SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 108 LGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLD 167
Query: 451 DLAQRCAQYKKDGCHFAKW 507
L+ R A Y + G FAKW
Sbjct: 168 GLSSRTAAYYQQGARFAKW 186
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLL 102
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +3
Query: 531 NTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
N PS A++E A LARYA+I Q +VPIVEPE+L DGEHD+DR V E
Sbjct: 194 NGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAE 244
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +1
Query: 283 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 462
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 69 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 128
Query: 463 RCAQYKKDGCHFAKWLA 513
RC +Y + G FAKW A
Sbjct: 129 RCKKYYEAGARFAKWRA 145
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +3
Query: 513 VLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
VLKIG N PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+++ VTE
Sbjct: 146 VLKIGNNEPSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIEKCAYVTE 202
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
+EL A I P KGILAADESTGT+GKR I VEN E NRR R+LL
Sbjct: 10 DELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELL 59
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +1
Query: 283 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 462
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 103 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 162
Query: 463 RCAQYKKDGCHFAKWLA 513
RC +Y + G FAKW A
Sbjct: 163 RCKKYYEAGARFAKWRA 179
Score = 75.4 bits (177), Expect = 3e-14
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +3
Query: 513 VLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTE 683
VLKIG N PS AI ENA LARYA ICQ +VPIVEPE+L DG HD+++ VTE
Sbjct: 180 VLKIGNNEPSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIEKCAYVTE 236
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/49 (63%), Positives = 33/49 (67%)
Frame = +2
Query: 107 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLL 253
EL A I P KGILAADESTGT+GKR I VEN E NRR R+LL
Sbjct: 45 ELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELL 93
>At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR1
protein, putative strong similarity to SP|O22315
Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis
thaliana}; cDNA NCBI_gi:15810292 supports a truncated
version while protein evidence supports a longer model.
Length = 278
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 520 RSAATPPRTKLSRKTPMFSPATLPSVRANASCRLSSPKSYLMASTTWTA 666
RS + P+ K R++P S + P R+ + R SP+ ++ W A
Sbjct: 228 RSKSRSPKAKSLRRSPAKSTSRSPRSRSRSKSRSLSPRGWVTVERHWIA 276
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +3
Query: 369 HHPRHQGRQGC----RPAVRIGRRMHHPGSGRPRPALRPVQ 479
HH + GC RP R+ R HHP R RP +R VQ
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHPIQERSRP-IRDVQ 83
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase
family protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 115 EDRSSNCSSRKGYPRR*RIHRYNGKAFAGHRRGEHRGEPSSLSPTPISSDAVLSENISG 291
+D S+ P +IH Y+ + A ++G HR SL P ++ V ISG
Sbjct: 14 DDEEEALSAMSSVPPPRKIHSYSHQLRATGQKGHHRQRQHSLDDIPKITEIVSGCGISG 72
>At1g58220.1 68414.m06612 myb family transcription factor contains
Pfam profile: PF00249: Myb-like DNA-binding domain
Length = 834
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = -3
Query: 554 DSLVRGGVAADLQHASHLAKWQPSFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMP 378
DS V + ++ ++ H +PS YW+ R + P + +++ ++G S+L P
Sbjct: 133 DSTVEAPLTINIPYSLHRGPQEPSDSYWSSRGMNITFPVFLPKAAEGHNGNGLASSLAP 191
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 375 PRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPL---RQVAC-VLKI 524
P + GCRP +RI R + SG + + + + PL RQ C V+KI
Sbjct: 192 PNFDSQHGCRPIIRIFGRNYSSKSGLSTEMVYSMSDKKKPLRHYRQAECDVIKI 245
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 562 TPMFSPATLPSVRANASCRLSSPKSYLMAST 654
TP FSPA PS +SP+SY AS+
Sbjct: 169 TPQFSPAFTPSGTPKILSTAASPRSYSAASS 199
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 214 EHRGEPSSLSPTPISSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIP 378
E PS T +SS + EN + V+ HE + + DG PL + + +P
Sbjct: 170 EASAAPSQTLLTKVSSISTTDENKASVVRSHEVPGKSSTDGRPLSTAGKSSANLP 224
>At1g17380.1 68414.m02120 expressed protein
Length = 274
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 184 GKAFAGHRRGEHRGEPSSLSPTPISSDAVLSENISG 291
GK A H+ G +GEPS+ S + A LSE+ G
Sbjct: 60 GKQNAMHKAGHSKGEPSTSSGGKVKDVADLSESQPG 95
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +3
Query: 393 QGCRPAVRIGRRMHHPGSGRPRPALR-PVQEGRL---PLRQVACVLKIGRNTPSYQAIQE 560
QG PA G PG G LR P +G + P++ V + +GRNTP + Q
Sbjct: 814 QGSLPAGYGGNVGFRPGQGGNSGVLRNPRMQGPIISRPMQPVGPMGGMGRNTPDLERWQR 873
Query: 561 NAN 569
+N
Sbjct: 874 GSN 876
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 357 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 461
G HH H + G +P+ M PG G+ +P
Sbjct: 470 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 504
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 357 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 461
G HH H + G +P+ M PG G+ +P
Sbjct: 486 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 520
>At5g07540.2 68418.m00864 glycine-rich protein (GRP16) oleosin;
glycine-rich protein 16 (GRP16) PMID:11431566
Length = 190
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 672 SGRGPGRARHQVRLRARQSARCVGSDRWKRSGREHWRFPG 553
SG GPG A R++ R VG W+ GR WR G
Sbjct: 148 SGGGPGGASGGAV--GRRTWRSVGRRTWRSVGRRTWRSVG 185
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 RSAATPPRTKLSRKTPMFSPATLPSVRANASCRLSSPKSYLMAST-TWTAP 669
RS + PP KTP P+T S + + R + S +ST +W+ P
Sbjct: 92 RSTSRPPTPTRKSKTPAKRPSTPTSRATSTTTRATLTSSSTTSSTRSWSRP 142
>At5g45400.1 68418.m05579 replication protein, putative similar to
replication protein A 70kDa [Oryza sativa (japonica
cultivar-group)] GI:13536993; contains InterPro entry
IPR004365: OB-fold nucleic acid binding domain, PF04057:
Replication factor-A protein 1, N-terminal domain
Length = 853
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = -3
Query: 458 ARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSAFW*RVSWNRITPDMF 279
A S +P VVH+SSD ++ P ++ S GV +++ +V N +
Sbjct: 160 ANSPQPQVVHNSSDAGRYCVSANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRY 219
Query: 278 SESTASELIGVGDNDDGSPLCSPRRCP 198
+ S+ G G G P SP P
Sbjct: 220 GQPQVSQRYGTG---SGYPETSPSTRP 243
>At5g17970.1 68418.m02108 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 780
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 167 ESTGTMGKRLQDIGVENTEENRRRYRQLLS 256
+ TG GK I TEE R+R+RQ L+
Sbjct: 118 KQTGDFGKAFDKICDVRTEEERQRWRQALT 147
>At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 629 GLDNRHDALALTDGSVAGENIGVFLDSLVRGG 534
G D RHD + + G+ I VF D+ +RGG
Sbjct: 25 GADTRHDFTSHLVKYLRGKGIDVFSDAKLRGG 56
>At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 629 GLDNRHDALALTDGSVAGENIGVFLDSLVRGG 534
G D RHD + + G+ I VF D+ +RGG
Sbjct: 25 GADTRHDFTSHLVKYLRGKGIDVFSDAKLRGG 56
>At3g60730.1 68416.m06794 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 519
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 369 HHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEG 485
H P QG RP R R H PG P+ RP Q G
Sbjct: 154 HGPARQGHGPTRPKHRPTRPNHGPGRSHHGPS-RPNQNG 191
>At2g45160.1 68415.m05622 scarecrow transcription factor family
protein
Length = 640
Score = 27.5 bits (58), Expect = 8.9
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Frame = -3
Query: 512 ASHLAKWQPSFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVP 333
++H + P A+R+ S V SDP+ G P+ PF+ + + + P
Sbjct: 183 SNHCLFYNPPLSPPAKRFNSGSLHQPVFPLSDPDPGHDPVRRQHQFQFPFYHNNQQQQFP 242
Query: 332 SSAFW*RVSWNRI-TPDMFSES---------TASELIGVGDNDDG 228
SS+ V+ + +P M + A+ELIG N++G
Sbjct: 243 SSSSSTAVAMVPVPSPGMAGDDQSVIIEQLFNAAELIGTTGNNNG 287
>At1g35614.1 68414.m04423 hypothetical protein
Length = 113
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 150 VSSPLTNPPVQWESVCRT 203
VSSP N V+WE CRT
Sbjct: 81 VSSPAINEVVKWEGKCRT 98
>At1g11760.1 68414.m01349 expressed protein weak similarity to Pfam
PF01648: 4'-phosphopantetheinyl transferase superfamily
Length = 393
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 104 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 244
+ L K + V + G+L + ES G L D +EN +E +R
Sbjct: 28 DSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFR 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,509,371
Number of Sequences: 28952
Number of extensions: 381800
Number of successful extensions: 1179
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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