Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0434.Seq
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.4  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 450 ILKSKKARQQFPDKN-VDDICRSVLKKHRETVTLMGFTP 337
           +LK  +A  +    N V D C+++ K H+E++ +    P
Sbjct: 292 LLKDTEAEVRAAAANKVKDFCQNLDKAHQESIIMNNILP 330


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 373 APRNGNADGIHTDSFKPGNRHVKRRL*GTMNMKSKIIR 260
           +P N N     T+S KP +  +   +  TM +  K++R
Sbjct: 425 SPSNTNTSTSSTNSNKPNSSDLNMLIKETMPLPRKLVR 462


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 463  QCCEGRFPAEVSLNKSM 513
            +CC G FP   SLN+ +
Sbjct: 975  RCCGGSFPLLRSLNRGL 991


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 782 INEGLYAKASSVELKNEYRDGT*PCSNWNQVCANTSR 672
           +N+G   K ++++LKN           WN+   N S+
Sbjct: 74  VNQGNLKKFNALKLKNPNLKTLVAIGGWNEGSVNYSK 110


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 579 YDNHGMHFSGSG 544
           Y+++G H+SG G
Sbjct: 388 YNHYGYHYSGDG 399


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 579 YDNHGMHFSGSG 544
           Y+++G H+SG G
Sbjct: 336 YNHYGYHYSGDG 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,406
Number of Sequences: 336
Number of extensions: 3864
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)