Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0434.Seq
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877     29   5.5  
03_04_0125 - 17487746-17487847,17488025-17488555,17488834-174891...    29   5.5  

>05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877
          Length = 446

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 561 HFSGSGLHILCAYACRHG 508
           H+ G G+H++C Y C HG
Sbjct: 11  HYGGGGIHLVCEY-CGHG 27


>03_04_0125 -
           17487746-17487847,17488025-17488555,17488834-17489102,
           17489161-17489257,17491060-17491161,17491235-17491367,
           17491589-17491681,17491756-17491844,17493578-17493700,
           17496908-17497004,17497440-17497639
          Length = 611

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 286 MNMKSKIIRELRLLFYYSHSPSSVLTNSSGINE 188
           +N   ++  EL ++FYYS   S+++ N S INE
Sbjct: 151 LNFFLEVELELWIIFYYSFGCSTLIPNHSEINE 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,228,904
Number of Sequences: 37544
Number of extensions: 431163
Number of successful extensions: 1144
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)