Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0434.Seq
         (782 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer pr...    30   3.1  
AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA...    30   3.1  
U82539-1|AAB71337.1|  214|Drosophila melanogaster arrowhead prot...    29   7.2  
BT025230-1|ABF17921.1|  275|Drosophila melanogaster FI01007p pro...    29   7.2  
AY071197-1|AAL48819.1|  275|Drosophila melanogaster RE24382p pro...    29   7.2  
AE014296-705|AAF47800.2|  214|Drosophila melanogaster CG1072-PA,...    29   7.2  
AE014296-704|AAN11572.1|  275|Drosophila melanogaster CG1072-PB,...    29   7.2  
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA...    29   9.5  
AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB...    29   9.5  

>AF281363-1|AAK12372.1| 1854|Drosophila melanogaster virilizer
            protein.
          Length = 1854

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 736  TSIEMAHSLAQIGIRFVPIPVETDEEFHTLAASLSQKL 623
            TS+E+ H ++ + +R + I  E D  F+ LA  L QK+
Sbjct: 1420 TSVEVTHGISILAVRNLVILTEHDFTFYHLAQLLKQKI 1457


>AE013599-3583|AAF46988.1| 1854|Drosophila melanogaster CG3496-PA
            protein.
          Length = 1854

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 736  TSIEMAHSLAQIGIRFVPIPVETDEEFHTLAASLSQKL 623
            TS+E+ H ++ + +R + I  E D  F+ LA  L QK+
Sbjct: 1420 TSVEVTHGISILAVRNLVILTEHDFTFYHLAQLLKQKI 1457


>U82539-1|AAB71337.1|  214|Drosophila melanogaster arrowhead
          protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 83 CCECGDPIDERRRLVVQGCRTCASC 9
          C  CG+PI +R  L V GC   A C
Sbjct: 8  CAACGEPISDRFFLEVGGCSWHAHC 32


>BT025230-1|ABF17921.1|  275|Drosophila melanogaster FI01007p
          protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 83 CCECGDPIDERRRLVVQGCRTCASC 9
          C  CG+PI +R  L V GC   A C
Sbjct: 8  CAACGEPISDRFFLEVGGCSWHAHC 32


>AY071197-1|AAL48819.1|  275|Drosophila melanogaster RE24382p
          protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 83 CCECGDPIDERRRLVVQGCRTCASC 9
          C  CG+PI +R  L V GC   A C
Sbjct: 8  CAACGEPISDRFFLEVGGCSWHAHC 32


>AE014296-705|AAF47800.2|  214|Drosophila melanogaster CG1072-PA,
          isoform A protein.
          Length = 214

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 83 CCECGDPIDERRRLVVQGCRTCASC 9
          C  CG+PI +R  L V GC   A C
Sbjct: 8  CAACGEPISDRFFLEVGGCSWHAHC 32


>AE014296-704|AAN11572.1|  275|Drosophila melanogaster CG1072-PB,
          isoform B protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 83 CCECGDPIDERRRLVVQGCRTCASC 9
          C  CG+PI +R  L V GC   A C
Sbjct: 8  CAACGEPISDRFFLEVGGCSWHAHC 32


>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
           isoform A protein.
          Length = 2061

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 581 GMTTTECIFLAAGFIFCVLMLADMDLFNDTSAGKRPSQHCPSG*F*NQKKPDS 423
           GM T+   +  AG +F ++ L   D+  DTS G+    +C S      + PDS
Sbjct: 658 GMATSTAKYSLAGELFALMRLGK-DISEDTSPGRLILSNCSSVYISKPEDPDS 709


>AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB,
           isoform B protein.
          Length = 2103

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -1

Query: 581 GMTTTECIFLAAGFIFCVLMLADMDLFNDTSAGKRPSQHCPSG*F*NQKKPDS 423
           GM T+   +  AG +F ++ L   D+  DTS G+    +C S      + PDS
Sbjct: 658 GMATSTAKYSLAGELFALMRLGK-DISEDTSPGRLILSNCSSVYISKPEDPDS 709


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,565,108
Number of Sequences: 53049
Number of extensions: 734870
Number of successful extensions: 2028
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2028
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)