Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0434.Seq
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 29 3.7
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 29 3.7
AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical ... 29 5.0
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 29 5.0
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 28 6.6
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = -1
Query: 710 CSNWNQVCANTSRNRRRISYVSRIPFTKAGNDGGESRSR*ERPGMTTTECIFLAAGFIFC 531
C +W T N IS ++ +G G + E+P +T E F +F
Sbjct: 688 CKSWRSRGGETP-NSGSISSSGQMSIQVSGLSGPSGKEFQEKP-LTLVE--FAELFRLFN 743
Query: 530 VLMLADM-DLFNDTSAGKRPSQHCP 459
M D+ D+FND + QHCP
Sbjct: 744 TRMRKDLRDVFNDVLSTATTPQHCP 768
>AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3b protein.
Length = 469
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 106 WFRRRIFIAVLRCNSSISDAESMMSAIFH*SLNCWLIRL 222
WFR + + RC SS+S ESM S I L+C +++L
Sbjct: 104 WFREMLKSDIPRCMSSLSSEESMGSFI----LDCVVLKL 138
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 106 WFRRRIFIAVLRCNSSISDAESMMSAIFH*SLNCWLIRL 222
WFR + + RC SS+S ESM S I L+C +++L
Sbjct: 558 WFREMLKSDIPRCMSSLSSEESMGSFI----LDCVVLKL 592
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 137 NTAIKMRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCASCQ 6
N+ K++ N +S T C CGDP +R G +C C+
Sbjct: 6 NSVSKIQWRNPSPVSDTSCLVCGDPHGKRH----YGAMSCNGCK 45
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 137 NTAIKMRRLNHQAISATHCCECGDPIDERRRLVVQGCRTCASCQ 6
N+ K++ N +S T C CGDP +R G +C C+
Sbjct: 6 NSVSKIQWRNPSPVSDTSCLVCGDPHGKRH----YGAMSCNGCK 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,007,275
Number of Sequences: 27780
Number of extensions: 373251
Number of successful extensions: 935
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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