Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0431.Seq
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    37   0.019
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    36   0.025
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    32   0.54 
Z83228-4|CAB05735.2|  318|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   2.9  
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +2

Query: 314 IGGRNTLPGEFPHMGAIGWQAVVGSWIFKCGGSLISNKFILTAAHC 451
           +GG  T+PG FP   A+  +A        CG S++    ++TAAHC
Sbjct: 28  VGGFETVPGAFPWTAALRNKATKAH---HCGASILDKTHLITAAHC 70



 Score = 31.5 bits (68), Expect = 0.71
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 622 DIALMELD-KDVFFSKYVQPACLWPHFDLSSLGKKASATGWGVVDAR 759
           DIA++E+    + F++Y QP CL     + + G++   +GWG +  R
Sbjct: 117 DIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGLR 163


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 36.3 bits (80), Expect = 0.025
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 398 KCGGSLISNKFILTAAHCTSFSLKDTS 478
           +CGGSLI   F+LTAAHC +   + TS
Sbjct: 83  RCGGSLIDPNFVLTAAHCFAKDRRPTS 109


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +2

Query: 401 CGGSLISNKFILTAAHC 451
           CGG+LI+ K +LTAAHC
Sbjct: 62  CGGTLITLKHVLTAAHC 78


>Z83228-4|CAB05735.2|  318|Caenorhabditis elegans Hypothetical
           protein F52F12.4 protein.
          Length = 318

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = +1

Query: 541 NDGIIPEDREIVNIIKHPSYNPPKKYFDIALMELDKDVFFSKYVQPACLWPHFDLSSLGK 720
           + GIIP D  ++     P YNP KK   +  + L KD   SK+V   C      LSS   
Sbjct: 135 SSGIIPSDALVIRGTSMPYYNPEKKR-SVPKLLLGKDP--SKWVDMICRNQLIPLSSFDD 191

Query: 721 K 723
           K
Sbjct: 192 K 192


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +1

Query: 613 KYFDIALMELDKDVFFSKYVQPACLWPHFDLSSLGKKASATGWG 744
           K  D A++E++K + FS+ V+P CL P  ++    K  +  GWG
Sbjct: 141 KGHDWAIVEVEKRIHFSENVRPICL-PRPNM-YYTKSLAVPGWG 182


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
            T08A11.1 protein.
          Length = 1872

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
 Frame = +3

Query: 21   DALQGSSDNNSDGN-KRPEEIWSWGYVDNTKSN--NQSATTEEPEVCKPYNPTVPNFEKP 191
            D  + SS +NS GN  +  ++W+WG     K N   +  T  +  V     P   +F   
Sbjct: 1054 DDRKHSSKSNSAGNASKKYKVWAWGSTGEEKWNVDMEIGTDWKSLVRSALLPITTDFFPD 1113

Query: 192  GRRI-SEVKCYEYLWNINFREEVIEDWTNAL 281
            G+ + ++ +  EY  +I    + +ED+ N L
Sbjct: 1114 GQTLQTQFRMNEY--SIEVTNKSLEDYRNGL 1142


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 386 SWIFKCGGSLISNKFILTAAHCTS 457
           +W   C G+L S + ILTA HC +
Sbjct: 70  TWSKHCSGTLTSPRHILTATHCAA 93


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 610 KKYFDIALMELDKDVFFSKYVQPACL 687
           + + DIA+ EL++ + FSK + PACL
Sbjct: 118 ESFNDIAVFELEEPIEFSKDIFPACL 143


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
            protein T08A11.1 protein.
          Length = 1872

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
 Frame = +3

Query: 21   DALQGSSDNNSDGN-KRPEEIWSWGYVDNTKSN--NQSATTEEPEVCKPYNPTVPNFEKP 191
            D  + SS +NS GN  +  ++W+WG     K N   +  T  +  V     P   +F   
Sbjct: 1054 DDRKHSSKSNSAGNASKKYKVWAWGSTGEEKWNVDMEIGTDWKSLVRSALLPITTDFFPD 1113

Query: 192  GRRI-SEVKCYEYLWNINFREEVIEDWTNAL 281
            G+ + ++ +  EY  +I    + +ED+ N L
Sbjct: 1114 GQTLQTQFRMNEY--SIEVTNKSLEDYRNGL 1142


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 401 CGGSLISNKFILTAAHCTSFSLKDTSI 481
           CGG LI+   ++T+AHC  FS  D ++
Sbjct: 46  CGGVLIAPSIVITSAHCV-FSGDDFAV 71


>Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical
           protein K02B9.2 protein.
          Length = 819

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 230 MEYKFQRRGDRRLDKCFKLHNNVQPSFAIGGRNTLPGEFPHMG 358
           ++Y +QR  D R  +  ++  +  P+ A G +NT  G+ P +G
Sbjct: 251 LQYNYQREADNRSSRLVQIQGHSAPNNANGLQNT-GGQAPDIG 292


>U80447-3|AAB37807.2|  910|Caenorhabditis elegans Hypothetical
           protein F55F8.3 protein.
          Length = 910

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 343 ISTHGCHRLAGSRWILDIQMWWIVD*Q 423
           I  HG H ++GS W   I+MW IVD Q
Sbjct: 494 IDIHGNHIVSGS-WDRTIKMWTIVDSQ 519


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,294,565
Number of Sequences: 27780
Number of extensions: 467620
Number of successful extensions: 1505
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)