Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0430.Seq
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   167   1e-43
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   167   1e-43
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.7  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.4  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  167 bits (405), Expect = 1e-43
 Identities = 71/83 (85%), Positives = 81/83 (97%)
 Frame = +1

Query: 256 DAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRS 435
           DAE+Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRS
Sbjct: 54  DAEAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRS 113

Query: 436 LEGYPFNPCLTESQYKEMEDKVS 504
           LEGYPFNPCLTE+QYKEME+KVS
Sbjct: 114 LEGYPFNPCLTEAQYKEMEEKVS 136



 Score =  117 bits (281), Expect = 1e-28
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = +3

Query: 510 LSSLEGELKGTFYPLTGM*KETQQQLIDDHFLFKEGDRFLQAANACSFWPNGRGIYHNEN 689
           LS LEGELKGTFYPLTGM KETQQ+LIDDHFLFKEGDRFLQAANA  FWP GRGIYHN++
Sbjct: 139 LSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGIYHNDD 198



 Score = 93.9 bits (223), Expect = 1e-21
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = +2

Query: 98  LQGSDSKSLLKKYLTKEVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYA 253
           L  SDSKSLLKKYL+K+VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYA
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYA 52


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  167 bits (405), Expect = 1e-43
 Identities = 71/83 (85%), Positives = 81/83 (97%)
 Frame = +1

Query: 256 DAESYSVFAELFDPIIEDYHNGFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRS 435
           DAE+Y++FA+LFDPIIEDYH GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRS
Sbjct: 70  DAEAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRS 129

Query: 436 LEGYPFNPCLTESQYKEMEDKVS 504
           LEGYPFNPCLTE+QYKEME+KVS
Sbjct: 130 LEGYPFNPCLTEAQYKEMEEKVS 152



 Score =  121 bits (291), Expect = 7e-30
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = +3

Query: 510 LSSLEGELKGTFYPLTGM*KETQQQLIDDHFLFKEGDRFLQAANACSFWPNGRGIYHNEN 689
           LS LEGELKGTFYPLTGM KETQQ+LIDDHFLFKEGDRFLQAANAC FWP GRGIYHN++
Sbjct: 155 LSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNDD 214



 Score =  117 bits (282), Expect = 9e-29
 Identities = 56/68 (82%), Positives = 60/68 (88%)
 Frame = +2

Query: 50  MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTKEVFDSLKNKKTSFGSTLLDCIQSGVENL 229
           MVD A L+KLE GFSKL  SDSKSLLKKYL+K+VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 230 DSGVGIYA 253
           DSGVGIYA
Sbjct: 61  DSGVGIYA 68


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = -2

Query: 444 PLERAAAAHAGGDHELAGGVEVAER---VHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEH 274
           P+++ A     GD  L G + V ER   +   PV+ +  V  LEA++  LD    Q    
Sbjct: 106 PVKKEAVVE--GDLVLGGLMMVHERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVP 163

Query: 273 GVRLG 259
           GVR+G
Sbjct: 164 GVRIG 168


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 145 GSIRQPEEQKDLIRIHPP 198
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 658 GQKLQALAACRKR-SPSLNRKWSSMSCCWV 572
           G K   ++AC     P + +K    +CCWV
Sbjct: 440 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 469


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 27 QVPEKPQQWSTPQPSR 74
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 658 GQKLQALAACRKR-SPSLNRKWSSMSCCWV 572
           G K   ++AC     P + +K    +CCWV
Sbjct: 530 GTKDIPISACSLPCEPGMIKKQQGDTCCWV 559


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +3

Query: 300 HRGLPQWLQEDRQAPAQEL 356
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,124
Number of Sequences: 438
Number of extensions: 3673
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)