Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0427.Seq
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   1.4  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   1.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.6  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 560 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 679
           N++ R  +EE ++M NE+ K   +   QK+  Q    + S
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEHTVVGS 243


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +2

Query: 497 RYPQVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 676
           R    S  EK   K   IT+   K  LS    E+ ++  E  ++   +  E   ++NAL 
Sbjct: 404 RIDTTSRAEKPLAKLGLITMFTSKADLSGITTEQKIHVDELVQHVSIRVDEGSSSENALS 463

Query: 677 SYCFSMKSTMEDEK 718
           +       T++DE+
Sbjct: 464 ATNIVEAKTIDDEQ 477


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +2

Query: 503  PQVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 631
            P + A++K      KI  TN++   ++++ ++     EK +NE
Sbjct: 1023 PNMKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKNE 1065


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 461 ASN*GHXRHRCQRYPQVSAIEKSTNKENKITITNDKGRLSKEEIERM 601
           AS+  H R         S I +    E K  IT  KG+L +++I+ +
Sbjct: 325 ASDNAHSRVDPDERAAASEIHQERRSELKRAITTGKGQLFQQQIDEV 371


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 55   VQYRGFEPYPSWHHGE 8
            + Y GFEPY   H G+
Sbjct: 1335 ISYYGFEPYERNHFGK 1350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,991
Number of Sequences: 2352
Number of extensions: 13603
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)