Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0421.Seq
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   3.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.0  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   8.8  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 236 EPPHLLVAEHGVTLSRTAPFF*RCIAR--FALHVIEQVAG 123
           +PP  LV +  V +S  AP     IAR  ++L  ++ V G
Sbjct: 275 QPPEFLVTQPVVRISEDAPIGTEVIARMIYSLSTVKAVDG 314


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 368 GLKEAYVSKMVRVNSDGDRWSLISLGNSRG 457
           G     +  +  VN DGD+W  +     RG
Sbjct: 280 GWNRRTIESIATVNIDGDKWDELIASGPRG 309


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 448 LSRTQIRGTQVRGQHAPS 501
           LSRT   G  + G H PS
Sbjct: 78  LSRTLTTGVDIEGHHIPS 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,349
Number of Sequences: 2352
Number of extensions: 12301
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)