Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0421.Seq
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-18|AAO38640.1| 441|Caenorhabditis elegans Prion-like-(... 66 3e-11
AF003130-17|AAB54127.1| 470|Caenorhabditis elegans Prion-like-(... 66 3e-11
AF003130-16|AAK68879.1| 457|Caenorhabditis elegans Prion-like-(... 66 3e-11
AF003130-15|AAM45365.1| 465|Caenorhabditis elegans Prion-like-(... 66 3e-11
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 29 3.0
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 29 4.0
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81032-5|CAL36491.1| 597|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81032-2|CAD88213.1| 558|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81032-1|CAB02719.1| 535|Caenorhabditis elegans Hypothetical pr... 27 9.2
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 27 9.2
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 27 9.2
AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical ... 27 9.2
>AF003130-18|AAO38640.1| 441|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform d protein.
Length = 441
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +2
Query: 287 DRVKAAVLGHLATLLPPATPRRRTTHAGLKEAYVSKMVRVNSDGDRWSLISLGNSRGHKS 466
D ++ +V + L+P + + LK+ Y+ KM++V++D D+WSL SL N G +
Sbjct: 145 DAIRDSVFMTIRELMPDNIGKEKFDFETLKDVYIRKMIKVSTDNDKWSLFSLNNEYG-RC 203
Query: 467 VELKFVDNMRRQFE 508
+ELKFV+ MRRQFE
Sbjct: 204 IELKFVNKMRRQFE 217
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 SVDSFQIALDSLL-AFHECAQLPIGENFYPTVVGESVYGDFNEALHHLSEKLIAT 672
SVDSFQI LD LL EC Q I T+ ES+YGD +A+ HL E+LI T
Sbjct: 219 SVDSFQIHLDPLLNELDECEQKKI------TI--ESMYGDVQQAMTHLHERLIDT 265
>AF003130-17|AAB54127.1| 470|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform a protein.
Length = 470
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +2
Query: 287 DRVKAAVLGHLATLLPPATPRRRTTHAGLKEAYVSKMVRVNSDGDRWSLISLGNSRGHKS 466
D ++ +V + L+P + + LK+ Y+ KM++V++D D+WSL SL N G +
Sbjct: 174 DAIRDSVFMTIRELMPDNIGKEKFDFETLKDVYIRKMIKVSTDNDKWSLFSLNNEYG-RC 232
Query: 467 VELKFVDNMRRQFE 508
+ELKFV+ MRRQFE
Sbjct: 233 IELKFVNKMRRQFE 246
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 SVDSFQIALDSLL-AFHECAQLPIGENFYPTVVGESVYGDFNEALHHLSEKLIAT 672
SVDSFQI LD LL EC Q I T+ ES+YGD +A+ HL E+LI T
Sbjct: 248 SVDSFQIHLDPLLNELDECEQKKI------TI--ESMYGDVQQAMTHLHERLIDT 294
>AF003130-16|AAK68879.1| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform b protein.
Length = 457
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +2
Query: 287 DRVKAAVLGHLATLLPPATPRRRTTHAGLKEAYVSKMVRVNSDGDRWSLISLGNSRGHKS 466
D ++ +V + L+P + + LK+ Y+ KM++V++D D+WSL SL N G +
Sbjct: 161 DAIRDSVFMTIRELMPDNIGKEKFDFETLKDVYIRKMIKVSTDNDKWSLFSLNNEYG-RC 219
Query: 467 VELKFVDNMRRQFE 508
+ELKFV+ MRRQFE
Sbjct: 220 IELKFVNKMRRQFE 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 SVDSFQIALDSLL-AFHECAQLPIGENFYPTVVGESVYGDFNEALHHLSEKLIAT 672
SVDSFQI LD LL EC Q I T+ ES+YGD +A+ HL E+LI T
Sbjct: 235 SVDSFQIHLDPLLNELDECEQKKI------TI--ESMYGDVQQAMTHLHERLIDT 281
>AF003130-15|AAM45365.1| 465|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform c protein.
Length = 465
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +2
Query: 287 DRVKAAVLGHLATLLPPATPRRRTTHAGLKEAYVSKMVRVNSDGDRWSLISLGNSRGHKS 466
D ++ +V + L+P + + LK+ Y+ KM++V++D D+WSL SL N G +
Sbjct: 169 DAIRDSVFMTIRELMPDNIGKEKFDFETLKDVYIRKMIKVSTDNDKWSLFSLNNEYG-RC 227
Query: 467 VELKFVDNMRRQFE 508
+ELKFV+ MRRQFE
Sbjct: 228 IELKFVNKMRRQFE 241
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 SVDSFQIALDSLL-AFHECAQLPIGENFYPTVVGESVYGDFNEALHHLSEKLIAT 672
SVDSFQI LD LL EC Q I T+ ES+YGD +A+ HL E+LI T
Sbjct: 243 SVDSFQIHLDPLLNELDECEQKKI------TI--ESMYGDVQQAMTHLHERLIDT 289
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 379 LSRDTQLSSFETRIFGDSIRGMKIRATHRPNAIRVYKVNSLQLPADKLM 427
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 376 LSRDTQLSSFETRIFGDSIRGMKIRATHRPNAIRVYKVNSLQLPADKLM 424
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical
protein T22B3.2b protein.
Length = 1035
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 379 LSRDTQLSSFETRIFGDSIRGMKIRATHRPNAIRVYKVNSLQLPADKLM 427
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical
protein T22B3.2a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 376 LSRDTQLSSFETRIFGDSIRGMKIRATHRPNAIRVYKVNSLQLPADKLM 424
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 6 AQNPL-GPPRVCTCSASRPDHKSV-NMGVIKLSPDTASL-ISACDLLDDMKSESSYTSSE 176
A +PL P ++ P+ KS + ++L+PD + +CDLL+D + ESS E
Sbjct: 291 AASPLKSPAKIEKPRLEEPEQKSKRSRRSLRLNPDAIEPPVKSCDLLEDEREESSSKKRE 350
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 381 LSRDTQLSSFETRIFGDAIRGMKIRAAHRPNAIRVYKVNSLQLPADKLM 429
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 384 LSRDTQLSSFETRIFGDAIRGMKIRAAHRPNAIRVYKVNSLQLPADKLM 432
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK757.3b protein.
Length = 1037
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 381 LSRDTQLSSFETRIFGDAIRGMKIRAAHRPNAIRVYKVNSLQLPADKLM 429
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical
protein ZK757.3a protein.
Length = 1040
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 409 LGR*PLVSHFSRQLSRTQIRGTQVRGQHAP-SVRV-SVDSFQIALDSLL 549
L R +S F ++ IRG ++R H P ++RV V+S Q+ D L+
Sbjct: 384 LSRDTQLSSFETRIFGDAIRGMKIRAAHRPNAIRVYKVNSLQLPADKLM 432
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 126 CDLLDDMKSESSYTSSEEGCGAGERHAVLSYEQVRRLNDIDLISLRSCPRPVTATALRPR 305
CD+ +K + S+ GA +S ++ NDIDL ++ S PV T RPR
Sbjct: 96 CDITSGLKK--FFGSNPTTSGASSSLPKIS--EITASNDIDLDAISSKATPVLKTVTRPR 151
>Z81032-5|CAL36491.1| 597|Caenorhabditis elegans Hypothetical
protein C02F4.2c protein.
Length = 597
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 168 SSEEGCGAGERHAVLSYEQVRRLNDIDLISLRSCPRPVTATALRP 302
++E GC +G H + S+E+ RRL D I+ R P T A P
Sbjct: 536 AAESGCDSG--HLIQSFEEARRL---DKINERMPPTMATPPAQSP 575
>Z81032-2|CAD88213.1| 558|Caenorhabditis elegans Hypothetical
protein C02F4.2b protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 168 SSEEGCGAGERHAVLSYEQVRRLNDIDLISLRSCPRPVTATALRP 302
++E GC +G H + S+E+ RRL D I+ R P T A P
Sbjct: 497 AAESGCDSG--HLIQSFEEARRL---DKINERMPPTMATPPAQSP 536
>Z81032-1|CAB02719.1| 535|Caenorhabditis elegans Hypothetical
protein C02F4.2a protein.
Length = 535
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 168 SSEEGCGAGERHAVLSYEQVRRLNDIDLISLRSCPRPVTATALRP 302
++E GC +G H + S+E+ RRL D I+ R P T A P
Sbjct: 474 AAESGCDSG--HLIQSFEEARRL---DKINERMPPTMATPPAQSP 513
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 583 ENFYPTVVGESVYGDFNEA 639
ENFYP+++ E+ +G F +A
Sbjct: 516 ENFYPSIMDEAFHGQFYDA 534
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 583 ENFYPTVVGESVYGDFNEA 639
ENFYP+++ E+ +G F +A
Sbjct: 516 ENFYPSIMDEAFHGQFYDA 534
>AL117206-6|CAB60450.1| 734|Caenorhabditis elegans Hypothetical
protein Y67A10A.9 protein.
Length = 734
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/63 (33%), Positives = 25/63 (39%)
Frame = -3
Query: 555 EREQGVESDLERVYRDSN*RRMLSTNLSSTDLCPRELPREMRDQRSPSEFTRTILET*AS 376
E V S D N RR TN+S L R L M D+ S + T+LE
Sbjct: 643 ESTVSVSSSASNNKNDVNNRRNPLTNISQHSLVNRRLLNVMPDEVDRSVGSSTVLENEVQ 702
Query: 375 FSP 367
SP
Sbjct: 703 DSP 705
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,421,386
Number of Sequences: 27780
Number of extensions: 281593
Number of successful extensions: 834
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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