Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0419.Seq
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.7  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 16/20 (80%)
 Frame = +3

Query: 510 MLITFKFETLNILMTRMTKS 569
           +++  +F TLN+ +T++TK+
Sbjct: 546 LMLKNRFVTLNVQLTKLTKN 565


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 361 RCIFSTENFTNWFGN 405
           +C  +    +NWFGN
Sbjct: 269 KCGITVSQVSNWFGN 283


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 289 SVLAHAFFFLHRVFEA*FLH 348
           S L + +F + +VFE+ +LH
Sbjct: 292 SFLNNFYFIIFQVFESFYLH 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,384
Number of Sequences: 336
Number of extensions: 3565
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)