Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0418.Seq
(784 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 80 5e-14
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 59 1e-07
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 57 6e-07
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 57 6e-07
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 47 5e-04
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 47 5e-04
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease... 46 0.001
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 44 0.004
UniRef50_A4QMB0 Cluster: ORF64d; n=2; cellular organisms|Rep: OR... 43 0.010
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole... 42 0.013
UniRef50_A7B5X1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.053
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 38 0.28
UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep: Transpo... 37 0.65
UniRef50_Q7WLP5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_UPI0000DD81E4 Cluster: PREDICTED: hypothetical protein;... 34 4.6
UniRef50_Q3WF73 Cluster: Sigma-70 region 2:Sigma-70 region 4; n=... 34 4.6
UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_A4QMB1 Cluster: ORF58e; n=7; cellular organisms|Rep: OR... 33 6.1
UniRef50_UPI0000D9D630 Cluster: PREDICTED: hypothetical protein;... 33 8.1
UniRef50_Q30XX1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 80.2 bits (189), Expect = 5e-14
Identities = 46/72 (63%), Positives = 47/72 (65%)
Frame = +3
Query: 294 AFCQRCFHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKPKILDSGGSMV 473
AF RC RTKVRGSK IRYRPSSN K + M A GKPK L SGGSMV
Sbjct: 3 AFVFRC---QRTKVRGSKTIRYRPSSNHKRCRLGIRECYWMTSLAPYGKPKFLGSGGSMV 59
Query: 474 AKLKLKGIDGRA 509
AKLKLKGIDGRA
Sbjct: 60 AKLKLKGIDGRA 71
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 58.8 bits (136), Expect = 1e-07
Identities = 38/70 (54%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 312 FHQSRTKVRGSKAIRYRPSSNRKYVI*RSADVTTMARRAASGKP----KILDSGGSMVAK 479
FH RTKV GSK IRY PS N K R G P K L SGGSMVA+
Sbjct: 6 FHCQRTKVGGSKMIRYHPSLNHK-----------RCRLGIGGSPYEKSKFLGSGGSMVAR 54
Query: 480 LKLKGIDGRA 509
LKLKGIDGRA
Sbjct: 55 LKLKGIDGRA 64
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 612 VGGGAWPFLVGGAICLVNSGNERDSSLL 695
+GGGAWPFLVGGAICLVNS NERD SLL
Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLL 28
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -1
Query: 661 TRQIAPPTKNGHAPPPTESRKSC*SVNPSGVRAW 560
+RQI PPTKNGHAPPPT+SRKS SVNP V W
Sbjct: 86 SRQITPPTKNGHAPPPTKSRKSSQSVNPYCVWTW 119
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2
Query: 627 MHHHPPNQERAVNLSILPVSGPG 559
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2
Query: 627 MHHHPPNQERAVNLSILPVSGPG 559
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
n=4; Eukaryota|Rep: RRNA intron-encoded homing
endonuclease - Oryza sativa (Rice)
Length = 66
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +3
Query: 396 SADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRA 509
SADV A K K L SGGSMVA+LKLKGIDGRA
Sbjct: 21 SADVAYRTPPAPYEKSKSLGSGGSMVARLKLKGIDGRA 58
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -2
Query: 648 LHQLRTAMHHHPPNQERAVNL 586
+H+L+TAMHHHP NQERA+NL
Sbjct: 177 IHELKTAMHHHPRNQERAINL 197
Score = 33.9 bits (74), Expect = 4.6
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = -3
Query: 686 RVSFVTGINQTNRSTN*ERPCTTTHRIKKELLICQSFRCPGLVRFPVLGQIKPQAPLLVG 507
++SFV GINQTN H +K + + + FPVL QIKPQAP L
Sbjct: 164 KISFVIGINQTNH----------IHELKTAMHHHPRNQERAINLFPVLSQIKPQAPRLNP 213
Query: 506 PSVNSFK 486
++ S K
Sbjct: 214 KTLISHK 220
>UniRef50_A4QMB0 Cluster: ORF64d; n=2; cellular organisms|Rep:
ORF64d - Pinus koraiensis (Korean pine)
Length = 64
Score = 42.7 bits (96), Expect = 0.010
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -3
Query: 572 CPGLVRFPVLGQIKPQAPLLVGPSVNSFKFQLCNHTP 462
C LVRF L +I+P AP LV VNSF+F C TP
Sbjct: 21 CQALVRFFALHRIEPHAPPLVRAPVNSFEFHSCERTP 57
>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3131,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 36
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 425 GSFRETKDFGLRGEYGCKAET 487
GS RETK FG RGEYGCKAET
Sbjct: 16 GSVRETKVFGFRGEYGCKAET 36
>UniRef50_A7B5X1 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 76
Score = 40.3 bits (90), Expect = 0.053
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -3
Query: 572 CPGLVRFPVLGQIKPQAPLLVGPSVNSFKFQLCNHTP 462
C VRF L +IKP AP LV VNSF+F C TP
Sbjct: 21 CQDQVRFFALLRIKPHAPPLVRVPVNSFEFHSCERTP 57
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 37.9 bits (84), Expect = 0.28
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 640 LVERFVWLIPVTNETLAC 693
LVE FVWLIP+TNETL C
Sbjct: 2 LVEGFVWLIPITNETLTC 19
>UniRef50_A5X2G8 Cluster: Transposase; n=2; Zea mays|Rep:
Transposase - Zea mays (Maize)
Length = 738
Score = 36.7 bits (81), Expect = 0.65
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = -1
Query: 526 RLHSWWALPSIPLSFSFATILPPESKIFGFPEAARRAIVVTSAD 395
+ + +W +IPL +SFA IL P +K+ GF RR + +TS D
Sbjct: 498 KYNKYWR--NIPLLYSFAFILDPRAKMKGFSRVLRRLMNLTSTD 539
>UniRef50_Q7WLP5 Cluster: Putative uncharacterized protein; n=1;
Bordetella bronchiseptica|Rep: Putative uncharacterized
protein - Bordetella bronchiseptica (Alcaligenes
bronchisepticus)
Length = 161
Score = 35.1 bits (77), Expect = 2.0
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 336 RGSKAIRYRPSSNRKYVI*RSADVTT--MARR--AASGKPKILDSGGSMVAKLKLKGIDG 503
RG++ +R R N + I +S D +T + + A+ GKP I G + +++ K
Sbjct: 38 RGARYLRDRAKENLRATIAQSGDESTGLLVQNVIASRGKPPIGSKGERYLVRVRQKTYTR 97
Query: 504 RAHQEWSLRLN--LTQHGKSHQARTP 575
+ + + R L +HG SHQ TP
Sbjct: 98 KGKEPVTTRKTAALKEHGSSHQPATP 123
>UniRef50_UPI0000DD81E4 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 565
Score = 33.9 bits (74), Expect = 4.6
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 418 LGGQLPGNQRFWTPGGVWLQS*NLKELTEGPTRSGA-CGLI*PNTGNLTRPGHR 576
LGG + G R +PG VW S +T GP+R G L+ P + L +P R
Sbjct: 57 LGGPVGGGCRVASPGLVWGASPGPHRITPGPSRGGCRTPLLLPRSPQLRKPERR 110
>UniRef50_Q3WF73 Cluster: Sigma-70 region 2:Sigma-70 region 4; n=2;
Frankia sp. EAN1pec|Rep: Sigma-70 region 2:Sigma-70
region 4 - Frankia sp. EAN1pec
Length = 277
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 360 RPSSNRKYVI*RSADVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRAHQEWSLRLNL 539
RP R Y+ + +V T A RA +P + D GG +VA +A +EW + L
Sbjct: 61 RPDGVRSYLFTIARNVITDAWRAERRRPSLGDDGGEVVAAAPAVDDVSQAIEEWVVAEAL 120
Query: 540 TQHGKSHQARTPE 578
+ +H+A E
Sbjct: 121 GRISLAHRAVVQE 133
>UniRef50_A6F7F6 Cluster: Putative uncharacterized protein; n=1;
Moritella sp. PE36|Rep: Putative uncharacterized protein
- Moritella sp. PE36
Length = 289
Score = 33.5 bits (73), Expect = 6.1
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 603 LDSVGGGAWPFL--VGGAICLVNSGNERDSSLLNRRRYLGVRGLVSRNSLT 749
+D VGGG+W + G +ICL+N ++ + R L V+ L+S SLT
Sbjct: 45 VDPVGGGSWIAMNQAGLSICLLNYYQQKPPEKILISRGLLVKSLISNTSLT 95
>UniRef50_A4QMB1 Cluster: ORF58e; n=7; cellular organisms|Rep:
ORF58e - Pinus koraiensis (Korean pine)
Length = 58
Score = 33.5 bits (73), Expect = 6.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 480 LKLKGIDGRAHQEWSLRLNLTQHGKSHQART 572
+KLKGIDG H+ WS+ N Q + +Q T
Sbjct: 1 MKLKGIDGGPHKRWSMWFNSMQSEEPYQGLT 31
>UniRef50_UPI0000D9D630 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 727
Score = 33.1 bits (72), Expect = 8.1
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 386 DIFTVRTRAVSNRLRTSNFRS*LMKTPLAKCFR*CSSCDDPRISL*R 246
++FT R +S+ L+ + RS L T A C SC+DP I L R
Sbjct: 247 NLFTARLNKISDGLKEKDIRSTLKVTSCADCRTYFLSCNDPTICLGR 293
>UniRef50_Q30XX1 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 256
Score = 33.1 bits (72), Expect = 8.1
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 402 DVTTMARRAASGKPKILDSGGSMVAKLKLKGIDGRAHQEWSLRLNLTQHGKSHQARTPE 578
DVTT+ RR P+ LD G V + +L + G AH L++ +G + AR E
Sbjct: 164 DVTTLYRRMMITLPQELDKGYRAVTEGRLADVAGIAHSMAGSFLDMVSYGPAQVARRIE 222
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,956,394
Number of Sequences: 1657284
Number of extensions: 18309287
Number of successful extensions: 44541
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 42499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44521
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -