Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0418.Seq
         (784 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    27   0.65 
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    25   2.6  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    25   2.6  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    25   2.6  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    25   2.6  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    25   2.6  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    25   2.6  
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    25   2.6  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   8.1  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   8.1  

>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+  S +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHSTDCDKFLICNHGTPVV------SKCPP 58


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SQCPP 58


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 527 QAPLLVGPSVNSFKFQLCNHTPPGVQNLWFPGSCPP 420
           Q P+L+    +  KF +CNH  P V        CPP
Sbjct: 29  QPPVLLAHPTDCDKFLICNHGTPVV------SKCPP 58


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 535 LSRRLHSWWALPSIPLSF 482
           L R+++SWW L  + + F
Sbjct: 38  LIRKVYSWWTLAMVLIQF 55


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 535 LSRRLHSWWALPSIPLSF 482
           L R+++SWW L  + + F
Sbjct: 38  LIRKVYSWWTLAMVLIQF 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 848,865
Number of Sequences: 2352
Number of extensions: 18100
Number of successful extensions: 45
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)