Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0416.Seq
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 176 8e-44
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 176 8e-44
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 176 8e-44
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 176 8e-44
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 176 8e-44
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 176 8e-44
M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein. 173 4e-43
U00548-1|AAA17960.1| 132|Homo sapiens immunoglobulin heavy chai... 31 6.1
AF343424-1|AAK51417.1| 104|Homo sapiens psoriasis vulgaris immu... 31 6.1
AF343422-1|AAK51416.1| 104|Homo sapiens psoriasis vulgaris immu... 31 6.1
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 176 bits (428), Expect = 8e-44
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 62 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPIN 121
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 122 TSLYLCDNKFHTEALTALLSDDSKFGFI 149
Score = 108 bits (259), Expect = 3e-23
Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS-IS 513
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTAS I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 514 SHV 522
S V
Sbjct: 64 SRV 66
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 176 bits (428), Expect = 8e-44
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 62 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPIN 121
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 122 TSLYLCDNKFHTEALTALLSDDSKFGFI 149
Score = 108 bits (259), Expect = 3e-23
Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS-IS 513
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTAS I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 514 SHV 522
S V
Sbjct: 64 SRV 66
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 176 bits (428), Expect = 8e-44
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 29 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPIN 88
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 89 TSLYLCDNKFHTEALTALLSDDSKFGFI 116
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/33 (87%), Positives = 30/33 (90%), Gaps = 1/33 (3%)
Frame = +1
Query: 427 MISLIIPPKDQISRVSKMLADEFGTAS-ISSHV 522
MISLIIPPKDQISRV+KMLADEFGTAS I S V
Sbjct: 1 MISLIIPPKDQISRVAKMLADEFGTASNIKSRV 33
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 176 bits (428), Expect = 8e-44
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 62 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPIN 121
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 122 TSLYLCDNKFHTEALTALLSDDSKFGFI 149
Score = 108 bits (259), Expect = 3e-23
Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS-IS 513
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTAS I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 514 SHV 522
S V
Sbjct: 64 SRV 66
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 176 bits (428), Expect = 8e-44
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 29 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPIN 88
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 89 TSLYLCDNKFHTEALTALLSDDSKFGFI 116
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/33 (87%), Positives = 30/33 (90%), Gaps = 1/33 (3%)
Frame = +1
Query: 427 MISLIIPPKDQISRVSKMLADEFGTAS-ISSHV 522
MISLIIPPKDQISRV+KMLADEFGTAS I S V
Sbjct: 1 MISLIIPPKDQISRVAKMLADEFGTASNIKSRV 33
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 176 bits (428), Expect = 8e-44
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGLV+YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 62 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPIN 121
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 122 TSLYLCDNKFHTEALTALLSDDSKFGFI 149
Score = 108 bits (259), Expect = 3e-23
Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS-IS 513
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTAS I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 514 SHV 522
S V
Sbjct: 64 SRV 66
>M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein.
Length = 428
Score = 173 bits (422), Expect = 4e-43
Identities = 81/88 (92%), Positives = 84/88 (95%)
Frame = +3
Query: 510 IKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEKKVNIDFEPFKPIN 689
IKSRVNRLSVLGAITSVQ RLKLY KVPPNGL +YCGTIVTEEGKEKKVNIDFEPFKPIN
Sbjct: 62 IKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLEVYCGTIVTEEGKEKKVNIDFEPFKPIN 121
Query: 690 TSLYLCDNKFHTEALTALLADDNKLGFI 773
TSLYLCDNKFHTEALTALL+DD+K GFI
Sbjct: 122 TSLYLCDNKFHTEALTALLSDDSKFGFI 149
Score = 108 bits (259), Expect = 3e-23
Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADEFGTAS-IS 513
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLADEFGTAS I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 514 SHV 522
S V
Sbjct: 64 SRV 66
>U00548-1|AAA17960.1| 132|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 132
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 495 WYSFYIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTIVTEEGKEK 650
W++ Y S R+++ + Q L+L + P + V YC + T +GK +
Sbjct: 59 WFNGYAVSVEGRITINPDTSKNQFSLQLNSVTPEDTAVYYCARVPTRKGKPR 110
>AF343424-1|AAK51417.1| 104|Homo sapiens psoriasis vulgaris
immunoglobulin heavy chain protein.
Length = 104
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 495 WYSFYIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTI 626
WYS Y S +R+++ T Q L+L + +P + V YC +
Sbjct: 39 WYSDYAVSVGSRITINADTTKNQVSLQLRSVIPEDSAVYYCARV 82
>AF343422-1|AAK51416.1| 104|Homo sapiens psoriasis vulgaris
immunoglobulin heavy chain protein.
Length = 104
Score = 30.7 bits (66), Expect = 6.1
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 495 WYSFYIKSRVNRLSVLGAITSVQHRLKLYTKVPPNGLVIYCGTI 626
WYS Y S +R+++ T Q L+L + +P + V YC +
Sbjct: 39 WYSDYAVSVGSRITINADTTKNQVSLQLRSVIPEDSAVYYCARV 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,506,318
Number of Sequences: 237096
Number of extensions: 2297825
Number of successful extensions: 12155
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12155
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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