Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0409.Seq
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22LV4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  
UniRef50_A6WC80 Cluster: Inner-membrane translocator; n=1; Kineo...    33   5.5  
UniRef50_Q7PPI6 Cluster: ENSANGP00000011420; n=2; Culicidae|Rep:...    33   9.6  
UniRef50_Q5CXL8 Cluster: Ser/Thr protein kinase; n=1; Cryptospor...    33   9.6  

>UniRef50_Q22LV4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 725

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = -3

Query: 480 DLSKLISRRGLSEGVYFALCRPRSAHAMALVEVISNTYNKIHYQTNLEIKTIDD 319
           D+S+ +  RG+ + ++F+  +      + L  + S  +N+IHYQ    I T+D+
Sbjct: 219 DISQYLLHRGMGDNIFFS--QTEKLFGIILQIIQSKKFNQIHYQKEFIINTLDE 270


>UniRef50_A6WC80 Cluster: Inner-membrane translocator; n=1;
           Kineococcus radiotolerans SRS30216|Rep: Inner-membrane
           translocator - Kineococcus radiotolerans SRS30216
          Length = 386

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +1

Query: 334 YF*ICLIMYLIVSIADYLDECHRVGRAWTA 423
           Y+ + LI+ ++V IAD L +  RVGRAW A
Sbjct: 217 YYWLALIVIILVLIADKLLQASRVGRAWEA 246


>UniRef50_Q7PPI6 Cluster: ENSANGP00000011420; n=2; Culicidae|Rep:
           ENSANGP00000011420 - Anopheles gambiae str. PEST
          Length = 875

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 147 RDNVVDGAIVPDTSLKPILTICW-E*CPRATYINEHKSQKNTDLWTATMPSTIFQKIDHH 323
           R+ + D    PD S++ I  +CW E  P  T + E ++ K++    +       +K    
Sbjct: 119 REVIADSRFSPDISIETIFNLCWVEHVPLQTNLAEIQALKSSSRGPSFFARYKLEKASGR 178

Query: 324 RWSL 335
           +WSL
Sbjct: 179 KWSL 182


>UniRef50_Q5CXL8 Cluster: Ser/Thr protein kinase; n=1;
           Cryptosporidium parvum Iowa II|Rep: Ser/Thr protein
           kinase - Cryptosporidium parvum Iowa II
          Length = 946

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 237 YINEHKSQKNTDLWTATMPSTIFQKIDHHRWSLFLNLFDNVSYC 368
           YI     ++NT L+       I Q+ +H  WSLF  + + +SYC
Sbjct: 436 YIQSEFMEENTTLFDLFEKGKITQRDNHLIWSLFRQILEILSYC 479


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,615,993
Number of Sequences: 1657284
Number of extensions: 12889465
Number of successful extensions: 28499
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28491
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)