Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0409.Seq
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.84 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = +3

Query: 153 NVVDGAIVPDTSLKPILTICWE*CPRATYINEHKSQKNTDLWTATMPSTIFQKIDHH 323
           N   GA  PD   + +    W        +  H+SQ + D+  A   S + + +D+H
Sbjct: 84  NKQSGAAAPDARTQRV----WSQYNFTNNVLVHRSQNSNDVCLAIPESLVIKLVDYH 136


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 613 HNKLLIKFHIIYLNRIF 663
           HN + +K  +IY NRIF
Sbjct: 139 HNLIRLKNCVIYFNRIF 155


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 187  DVSGTIAPSTTLSRPARSTSTESN 116
            D S T+APSTT   P +  +T ++
Sbjct: 2287 DASSTMAPSTTPMVPDKPVTTTTS 2310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,628
Number of Sequences: 336
Number of extensions: 3340
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)