Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0408.Seq
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein. 51 4e-06
X74819-1|CAA52818.1| 288|Homo sapiens cardiac troponin T protein. 50 7e-06
S64668-1|AAB27731.1| 288|Homo sapiens troponin T protein. 50 7e-06
L40162-1|AAA67422.1| 288|Homo sapiens troponin T cardiac isofor... 50 7e-06
AY044273-2|AAK92232.1| 274|Homo sapiens truncated cardiac tropo... 50 7e-06
AY044273-1|AAK92231.1| 288|Homo sapiens cardiac troponin T prot... 50 7e-06
AK125236-1|BAC86093.1| 232|Homo sapiens protein ( Homo sapiens ... 50 7e-06
AF004422-1|AAC39590.1| 288|Homo sapiens troponin T protein. 50 7e-06
M21984-1|AAA36777.1| 258|Homo sapiens troponin T protein. 49 2e-05
DQ778624-1|ABG77458.1| 250|Homo sapiens troponin T type 3 protein. 49 2e-05
CR541927-1|CAG46725.1| 256|Homo sapiens TNNT3 protein. 49 2e-05
BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein pr... 49 2e-05
BT019997-1|AAV38800.1| 256|Homo sapiens troponin T3, skeletal, ... 49 2e-05
BC117327-1|AAI17328.1| 250|Homo sapiens troponin T type 3 (skel... 49 2e-05
BC050446-1|AAH50446.1| 272|Homo sapiens TNNT3 protein protein. 49 2e-05
AF026276-1|AAF21629.1| 258|Homo sapiens fast skeletal troponin ... 49 2e-05
X79857-1|CAA56237.1| 255|Homo sapiens troponin T protein. 48 3e-05
EF179183-1|ABN05286.1| 295|Homo sapiens troponin T type 2 (card... 48 3e-05
BC002653-1|AAH02653.1| 285|Homo sapiens troponin T type 2 (card... 48 3e-05
AY277394-1|AAP96757.1| 226|Homo sapiens troponin T cardiac isof... 48 3e-05
BC062430-1|AAH62430.1| 154|Homo sapiens TNNT3 protein protein. 45 2e-04
S69209-1|AAB30273.1| 251|Homo sapiens troponin T slow isoform p... 42 0.003
S69208-1|AAB30272.1| 262|Homo sapiens troponin T protein. 42 0.003
M19308-1|AAA61205.1| 251|Homo sapiens TNNT1 protein. 42 0.003
BT019630-1|AAV38436.1| 251|Homo sapiens troponin T1, skeletal, ... 42 0.003
BC107798-1|AAI07799.1| 192|Homo sapiens TNNT1 protein protein. 42 0.003
BC034143-1|AAH34143.1| 262|Homo sapiens TNNT1 protein protein. 42 0.003
BC022086-1|AAH22086.2| 297|Homo sapiens TNNT1 protein protein. 42 0.003
BC010963-1|AAH10963.1| 262|Homo sapiens TNNT1 protein protein. 42 0.003
AJ011712-2|CAA09751.1| 262|Homo sapiens slow skeletal muscle tr... 42 0.003
AJ011712-1|CAA09750.1| 251|Homo sapiens slow skeletal muscle tr... 42 0.003
Z46940-3|CAB92526.1| 103|Homo sapiens protamin 3 protein. 39 0.016
BC053542-1|AAH53542.1| 628|Homo sapiens DYNC1I1 protein protein. 35 0.26
BC037854-1|AAH37854.1| 628|Homo sapiens DYNC1I1 protein protein. 35 0.26
BC032945-1|AAH32945.1| 628|Homo sapiens DYNC1I1 protein protein. 35 0.26
BC022540-1|AAH22540.1| 625|Homo sapiens DYNC1I1 protein protein. 35 0.26
AK091339-1|BAC03639.1| 628|Homo sapiens protein ( Homo sapiens ... 35 0.26
AF123074-1|AAD26852.1| 608|Homo sapiens cytoplasmic dynein inte... 35 0.26
AF063228-1|AAC33443.1| 645|Homo sapiens cytoplasmic dynein inte... 35 0.26
AC022261-1|AAS01994.1| 142|Homo sapiens unknown protein. 35 0.26
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 3.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 3.2
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 5.7
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 5.7
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 5.7
AF084479-1|AAD08675.1| 1483|Homo sapiens Williams-Beuren syndrom... 30 9.9
AF072810-1|AAC97879.1| 1425|Homo sapiens transcription factor WS... 30 9.9
AB032253-1|BAA89210.1| 1527|Homo sapiens bromodomain adjacent to... 30 9.9
>X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein.
Length = 250
Score = 51.2 bits (117), Expect = 4e-06
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
+ AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 183 IQKAQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAE 240
>X74819-1|CAA52818.1| 288|Homo sapiens cardiac troponin T protein.
Length = 288
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 192 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAE 246
>S64668-1|AAB27731.1| 288|Homo sapiens troponin T protein.
Length = 288
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 192 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAE 246
>L40162-1|AAA67422.1| 288|Homo sapiens troponin T cardiac isoform
protein.
Length = 288
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 192 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAE 246
>AY044273-2|AAK92232.1| 274|Homo sapiens truncated cardiac troponin
T protein.
Length = 274
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 192 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAE 246
>AY044273-1|AAK92231.1| 288|Homo sapiens cardiac troponin T
protein.
Length = 288
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 192 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAE 246
>AK125236-1|BAC86093.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ43246 fis, clone HEART1000139, highly similar
to TROPONIN T, CARDIAC MUSCLE ISOFORMS. ).
Length = 232
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 136 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEAE 190
>AF004422-1|AAC39590.1| 288|Homo sapiens troponin T protein.
Length = 288
Score = 50.4 bits (115), Expect = 7e-06
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 572 AQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
AQ ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE E
Sbjct: 192 AQTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQTIYNLEAE 246
>M21984-1|AAA36777.1| 258|Homo sapiens troponin T protein.
Length = 258
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 158 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 213
>DQ778624-1|ABG77458.1| 250|Homo sapiens troponin T type 3 protein.
Length = 250
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 150 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 205
>CR541927-1|CAG46725.1| 256|Homo sapiens TNNT3 protein.
Length = 256
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 156 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 211
>BX640689-1|CAE45814.1| 256|Homo sapiens hypothetical protein
protein.
Length = 256
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 156 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 211
>BT019997-1|AAV38800.1| 256|Homo sapiens troponin T3, skeletal,
fast protein.
Length = 256
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 156 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 211
>BC117327-1|AAI17328.1| 250|Homo sapiens troponin T type 3
(skeletal, fast) protein.
Length = 250
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 150 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 205
>BC050446-1|AAH50446.1| 272|Homo sapiens TNNT3 protein protein.
Length = 272
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 172 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 227
>AF026276-1|AAF21629.1| 258|Homo sapiens fast skeletal troponin T
protein.
Length = 258
Score = 48.8 bits (111), Expect = 2e-05
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETE 733
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE + +LE +
Sbjct: 158 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWETLHQLEID 213
>X79857-1|CAA56237.1| 255|Homo sapiens troponin T protein.
Length = 255
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE
Sbjct: 153 HFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEA 212
Query: 731 E 733
E
Sbjct: 213 E 213
>EF179183-1|ABN05286.1| 295|Homo sapiens troponin T type 2
(cardiac) protein.
Length = 295
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE
Sbjct: 193 HFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEA 252
Query: 731 E 733
E
Sbjct: 253 E 253
>BC002653-1|AAH02653.1| 285|Homo sapiens troponin T type 2
(cardiac) protein.
Length = 285
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE
Sbjct: 183 HFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEA 242
Query: 731 E 733
E
Sbjct: 243 E 243
>AY277394-1|AAP96757.1| 226|Homo sapiens troponin T cardiac isoform
protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + ER K Q E EKK L+ R K L I+ L+ D+LR+KA+ELW+ I LE
Sbjct: 124 HFGGYIQKTERKSGKRQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIYNLEA 183
Query: 731 E 733
E
Sbjct: 184 E 184
>BC062430-1|AAH62430.1| 154|Homo sapiens TNNT3 protein protein.
Length = 154
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2
Query: 563 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 709
L+ A +R K + E +KKI L+ R KPL I+ L DKLR KA+ELWE
Sbjct: 54 LAKADQKRGKKQTAREMKKKI-LAERRKPLNIDHLGEDKLRDKAKELWE 101
>S69209-1|AAB30273.1| 251|Homo sapiens troponin T slow isoform
protein.
Length = 251
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 149 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 208
Query: 731 E 733
E
Sbjct: 209 E 209
>S69208-1|AAB30272.1| 262|Homo sapiens troponin T protein.
Length = 262
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 160 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 219
Query: 731 E 733
E
Sbjct: 220 E 220
>M19308-1|AAA61205.1| 251|Homo sapiens TNNT1 protein.
Length = 251
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 149 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 208
Query: 731 E 733
E
Sbjct: 209 E 209
>BT019630-1|AAV38436.1| 251|Homo sapiens troponin T1, skeletal,
slow protein.
Length = 251
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 149 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 208
Query: 731 E 733
E
Sbjct: 209 E 209
>BC107798-1|AAI07799.1| 192|Homo sapiens TNNT1 protein protein.
Length = 192
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 90 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 149
Query: 731 E 733
E
Sbjct: 150 E 150
>BC034143-1|AAH34143.1| 262|Homo sapiens TNNT1 protein protein.
Length = 262
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 160 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 219
Query: 731 E 733
E
Sbjct: 220 E 220
>BC022086-1|AAH22086.2| 297|Homo sapiens TNNT1 protein protein.
Length = 297
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 195 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 254
Query: 731 E 733
E
Sbjct: 255 E 255
>BC010963-1|AAH10963.1| 262|Homo sapiens TNNT1 protein protein.
Length = 262
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 160 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 219
Query: 731 E 733
E
Sbjct: 220 E 220
>AJ011712-2|CAA09751.1| 262|Homo sapiens slow skeletal muscle
troponin T protein.
Length = 262
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 160 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 219
Query: 731 E 733
E
Sbjct: 220 E 220
>AJ011712-1|CAA09750.1| 251|Homo sapiens slow skeletal muscle
troponin T protein.
Length = 251
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 554 NFGLSNAQLERNKTKEQLEEEKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVKLET 730
+FG + E+ + K Q E K+ LS R KPL I+ + ++LR+KAQEL + I +LE+
Sbjct: 149 HFGGYLVKAEQKRGKRQTGREMKVRILSERKKPLDIDYMGEEQLREKAQELSDWIHQLES 208
Query: 731 E 733
E
Sbjct: 209 E 209
>Z46940-3|CAB92526.1| 103|Homo sapiens protamin 3 protein.
Length = 103
Score = 39.1 bits (87), Expect = 0.016
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = +2
Query: 482 PGYAPGHERASKTGPNFTIQK-----KSENFGLSNAQLERNKTKEQLEEEKKISLSIRIK 646
PG++PGH G +++K +NF LS+A E + +E+ EEE+K L ++ K
Sbjct: 14 PGHSPGHSTGHGRGHESSMKKLMACVSQDNFSLSSAGEEEEEEEEEGEEEEKEELPVQGK 73
Query: 647 PLTIE 661
L +E
Sbjct: 74 LLLLE 78
>BC053542-1|AAH53542.1| 628|Homo sapiens DYNC1I1 protein protein.
Length = 628
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>BC037854-1|AAH37854.1| 628|Homo sapiens DYNC1I1 protein protein.
Length = 628
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>BC032945-1|AAH32945.1| 628|Homo sapiens DYNC1I1 protein protein.
Length = 628
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>BC022540-1|AAH22540.1| 625|Homo sapiens DYNC1I1 protein protein.
Length = 625
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>AK091339-1|BAC03639.1| 628|Homo sapiens protein ( Homo sapiens
cDNA FLJ34020 fis, clone FCBBF2002904, highly similar to
DYNEIN INTERMEDIATE CHAIN 1, CYTOSOLIC. ).
Length = 628
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>AF123074-1|AAD26852.1| 608|Homo sapiens cytoplasmic dynein
intermediate chain 1 protein.
Length = 608
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>AF063228-1|AAC33443.1| 645|Homo sapiens cytoplasmic dynein
intermediate chain 1 protein.
Length = 645
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>AC022261-1|AAS01994.1| 142|Homo sapiens unknown protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.26
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 438 IEEKRQRLEEAEKKRQAMLQAMKEPARPDPTSPSKRR 548
I E+++R EE KK++A +Q KEP + D KRR
Sbjct: 21 IREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRR 57
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 172 PAPKQEGEGDPEFIKRQDQKRSDLDEQLRNTSTNGANSGPRRRMSSNALKRSRPSAR 342
P+P++ + + E K + + RS + R S + +++ PRRR S + +R P R
Sbjct: 259 PSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRRR 315
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.5 bits (68), Expect = 3.2
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 172 PAPKQEGEGDPEFIKRQDQKRSDLDEQLRNTSTNGANSGPRRRMSSNALKRSRPSAR 342
P+P++ + + E K + + RS + R S + +++ PRRR S + +R P R
Sbjct: 259 PSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRRRPSPRRR 315
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 172 PAPKQEGEGDPEFIKRQDQKRSDLDEQLRNTSTNGANSGPRRRMSSNALK---RSRPSAR 342
P+P++ + + E K Q + RS + R S + +++ PRRR S + R RPS R
Sbjct: 259 PSPEKNSKKEKEKEKTQPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPR 318
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 5.7
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 172 PAPKQEGEGDPEFIKRQDQKRSDLDEQLRNTSTNGANSGPRRRMSSNAL--KRSRPSAR 342
P+P++ + + E K + + RS + R S + +++ PRRR S+ + R RPS R
Sbjct: 259 PSPEKNSKKEQEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSDKMYSPRRRPSPR 317
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 5.7
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 172 PAPKQEGEGDPEFIKRQDQKRSDLDEQLRNTSTNGANSGPRRRMSSNAL--KRSRPSAR 342
P+P++ + + E K + + RS + R S + +++ PRRR S+ + R RPS R
Sbjct: 259 PSPEKNSKKEQEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSDKMYSPRRRPSPR 317
>AF084479-1|AAD08675.1| 1483|Homo sapiens Williams-Beuren syndrome
deletion transcript 9 protein.
Length = 1483
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 482 PGYAPGHERASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP-LTI 658
P P R + G N+T + SE+ + E + +E+ EEE +R++P TI
Sbjct: 1229 PACQPATARRNSRGRNYTEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTI 1288
Query: 659 EG 664
G
Sbjct: 1289 RG 1290
>AF072810-1|AAC97879.1| 1425|Homo sapiens transcription factor WSTF
protein.
Length = 1425
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 482 PGYAPGHERASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP-LTI 658
P P R + G N+T + SE+ + E + +E+ EEE +R++P TI
Sbjct: 1229 PACQPATARRNSRGRNYTEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTI 1288
Query: 659 EG 664
G
Sbjct: 1289 RG 1290
>AB032253-1|BAA89210.1| 1527|Homo sapiens bromodomain adjacent to zinc
finger domain 1B protein.
Length = 1527
Score = 29.9 bits (64), Expect = 9.9
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 482 PGYAPGHERASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKP-LTI 658
P P R + G N+T + SE+ + E + +E+ EEE +R++P TI
Sbjct: 1229 PACQPATARRNSRGRNYTEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTI 1288
Query: 659 EG 664
G
Sbjct: 1289 RG 1290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,485,760
Number of Sequences: 237096
Number of extensions: 1349847
Number of successful extensions: 5673
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 5149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5660
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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