Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0406.Seq
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    26   0.90 
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    26   1.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.4  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   8.4  

>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 348 IEKFPVRLTPGITELVKELHERGVIV 425
           ++KF V LTPG+  +V+   +  V +
Sbjct: 531 LDKFRVNLTPGVNNIVRRSEQSSVTI 556


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +3

Query: 51  FEKQPAVRDVEDALTGVDQRDVASTDCPGVVQ 146
           + +   ++++   +T + +R++ STD  GVV+
Sbjct: 158 YAQHSQIKNIRAKMTAIIKREITSTDLKGVVE 189


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -1

Query: 242 TSSPFPQ---NLASSSMPSSCMTVESTSKQTQSAVLNNS 135
           TS+P P    ++AS S  SS MT  +T+     +V + S
Sbjct: 266 TSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYS 304


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -1

Query: 242 TSSPFPQ---NLASSSMPSSCMTVESTSKQTQSAVLNNS 135
           TS+P P    ++AS S  SS MT  +T+     +V + S
Sbjct: 266 TSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYS 304


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 348 IEKFPVRLTPGITELVKELHERGVIV 425
           ++KF V L PG   +V+   +  V +
Sbjct: 530 LDKFTVNLNPGTNNIVRRSEQSSVTI 555


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,725
Number of Sequences: 2352
Number of extensions: 12549
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)