Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0405.Seq
(663 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 3.0
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 22 3.9
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 5.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.2
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 22 5.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.2
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 6.8
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 89 SVFNVAYCRLLFKLCKCNKDRY 24
++FN A+C L +L K+RY
Sbjct: 811 TIFNAAHCYLATELVLMLKNRY 832
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 275 YDIPGSVEEETGHH 316
YD+ GS + TGHH
Sbjct: 207 YDLRGSWDGVTGHH 220
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 275 YDIPGSVEEETGHH 316
YD G E ETGH+
Sbjct: 279 YDFHGKWERETGHN 292
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFN 242
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFN 242
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFN 242
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFN 242
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 170 VNANGETKRQRTSYTRYQTLELEKEFHFN 198
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFN 242
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 2 VNANGETKRQRTSYTRYQTLELEKEFHFN 30
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +2
Query: 443 IQKSNRTGRGETKHPNYQHLR*RLKFYFN 529
+ + T R T + YQ L +F+FN
Sbjct: 214 VNANGETKRQRTSYTRYQTLELEKEFHFN 242
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.4 bits (43), Expect = 6.8
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -2
Query: 263 CFRVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWT 129
C R + P+P PS + S S S V +NS+T
Sbjct: 18 CVRKRPHSPEPYPPRCPPIYEPSCQYSPVSNSDSENSEVSSNSYT 62
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,938
Number of Sequences: 336
Number of extensions: 2873
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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