Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0401.Seq
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11860.2 68414.m01366 aminomethyltransferase, putative simila... 30 1.4
At1g11860.1 68414.m01365 aminomethyltransferase, putative simila... 30 1.4
At3g22420.2 68416.m02830 protein kinase family protein contains ... 30 1.9
At3g22420.1 68416.m02829 protein kinase family protein contains ... 30 1.9
At1g28600.1 68414.m03522 lipase, putative similar to lipase [Ara... 29 3.3
At2g33390.1 68415.m04093 expressed protein 29 4.3
At1g49160.2 68414.m05512 protein kinase family protein contains ... 29 4.3
At1g49160.1 68414.m05511 protein kinase family protein contains ... 29 4.3
At5g41990.1 68418.m05112 protein kinase family protein contains ... 28 5.7
At1g64630.1 68414.m07327 protein kinase family protein contains ... 28 5.7
At3g18750.1 68416.m02380 protein kinase family protein contains ... 28 7.5
At2g37050.1 68415.m04546 leucine-rich repeat family protein / pr... 27 9.9
At1g16880.2 68414.m02039 uridylyltransferase-related similar to ... 27 9.9
At1g16880.1 68414.m02040 uridylyltransferase-related similar to ... 27 9.9
>At1g11860.2 68414.m01366 aminomethyltransferase, putative similar
to aminomethyltransferase, mitochondrial precursor
SP:O49849 from [Flaveria anomala]
Length = 408
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 386 LHKERSFRQIPILMYPPVLHFVTVRDLTSLIFIFFRLL*WCRTSCESARVGTT 544
+H ERS + + PVL +T DL+ L F F++L ++C R G T
Sbjct: 177 IHDERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQILDINGSTCFLTRTGYT 229
>At1g11860.1 68414.m01365 aminomethyltransferase, putative similar
to aminomethyltransferase, mitochondrial precursor
SP:O49849 from [Flaveria anomala]
Length = 408
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 386 LHKERSFRQIPILMYPPVLHFVTVRDLTSLIFIFFRLL*WCRTSCESARVGTT 544
+H ERS + + PVL +T DL+ L F F++L ++C R G T
Sbjct: 177 IHDERSLLALQGPLAAPVLQHLTKEDLSKLYFGNFQILDINGSTCFLTRTGYT 229
>At3g22420.2 68416.m02830 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 627
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKY 185
F+ P + +Y EL+ Y G+C L + T Y
Sbjct: 224 FMAPEVYDEEYNELVDVYAFGMCVLEMVTFDY 255
>At3g22420.1 68416.m02829 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 568
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKY 185
F+ P + +Y EL+ Y G+C L + T Y
Sbjct: 192 FMAPEVYDEEYNELVDVYAFGMCVLEMVTFDY 223
>At1g28600.1 68414.m03522 lipase, putative similar to lipase
[Arabidopsis thaliana] GI:1145627; contains InterPro
Entry IPR001087 Lipolytic enzyme, G-D-S-L family
Length = 393
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -3
Query: 197 DT*VLFMYVNLQLIRGTSLSTPQSN-QTIVAFGDNIQPTEFLAGSSQWVAIPI 42
D+ V+F++ L + S TP N ++I++FGD+I T L G S +P+
Sbjct: 5 DSLVIFLFSTL-FVTIVSSETPCPNFKSIISFGDSIADTGNLVGLSDRNQLPV 56
>At2g33390.1 68415.m04093 expressed protein
Length = 98
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 11 QEQCFAESTTGSESRPTEKIRRETQW 88
+ QC G SR T+KI+R QW
Sbjct: 38 ESQCLLPPRKGGMSRSTDKIKRTVQW 63
>At1g49160.2 68414.m05512 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKYFSC 176
F+ P + Y EL Y G+C L + T +Y C
Sbjct: 196 FMAPELYDENYNELADIYSFGMCMLEMVTFEYPYC 230
>At1g49160.1 68414.m05511 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 539
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKYFSC 176
F+ P + Y EL Y G+C L + T +Y C
Sbjct: 178 FMAPELYDENYNELADIYSFGMCMLEMVTFEYPYC 212
>At5g41990.1 68418.m05112 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 563
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKY 185
F+ P + +Y EL+ Y G+C L + T +Y
Sbjct: 197 FMAPELYEEEYNELVDIYSFGMCMLEMVTCEY 228
>At1g64630.1 68414.m07327 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719;
contains serine/threonine protein kinases active-site
signature, PROSITE:PS00108
Length = 524
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKY 185
F+ P + +Y EL+ Y G+C L + T +Y
Sbjct: 184 FMAPELYEEEYNELVDIYSFGMCMLEMVTCEY 215
>At3g18750.1 68416.m02380 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 567
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 280 FLNPRQFG*QYGELLSQYVLGLCTLPLKTLKYFSC 176
F+ P + Y EL Y G+C L + T Y C
Sbjct: 196 FMAPELYDENYNELADIYSFGMCMLEMVTFDYPYC 230
>At2g37050.1 68415.m04546 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 934
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 699 GIKWLPEPINIYNKAATHLEI*ALMTQFLKYNGYPTLQTETHYCFTAEI 553
G+KW P+ IY + A + TQ+ +P YC+T +
Sbjct: 44 GLKWSPDNHLIYGETANISSVNETRTQYTTLRHFPA--DSRKYCYTLNV 90
>At1g16880.2 68414.m02039 uridylyltransferase-related similar to
[Protein-PII] uridylyltransferase (PII uridylyl-
transferase) (Uridylyl removing enzyme)
(UTase)(SP:Q9AC53) [Caulobacter crescentus]
Length = 213
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 284 LFFKSKTIWLAIRRTVITICVGPMYITFEDT*VLFMYVNLQLIRGTSLSTPQSNQTIVAF 105
L F + LA+RR +C+ P +TF V VNL+ +R ++L SN T V
Sbjct: 11 LCFTDASSSLALRRDCGALCLPPRTVTFGF--VDKPLVNLERLRLSTLKIRASNATAVEN 68
Query: 104 G 102
G
Sbjct: 69 G 69
>At1g16880.1 68414.m02040 uridylyltransferase-related similar to
[Protein-PII] uridylyltransferase (PII uridylyl-
transferase) (Uridylyl removing enzyme)
(UTase)(SP:Q9AC53) [Caulobacter crescentus]
Length = 290
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = -3
Query: 284 LFFKSKTIWLAIRRTVITICVGPMYITFEDT*VLFMYVNLQLIRGTSLSTPQSNQTIVAF 105
L F + LA+RR +C+ P +TF V VNL+ +R ++L SN T V
Sbjct: 11 LCFTDASSSLALRRDCGALCLPPRTVTFGF--VDKPLVNLERLRLSTLKIRASNATAVEN 68
Query: 104 G 102
G
Sbjct: 69 G 69
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,643,474
Number of Sequences: 28952
Number of extensions: 355240
Number of successful extensions: 726
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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