Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0400X.Seq
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 77 5e-15
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 77 5e-15
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 77 5e-15
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 75 3e-14
U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical pr... 53 1e-07
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 43 1e-04
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 43 1e-04
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 43 1e-04
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 43 1e-04
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 32 0.26
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 32 0.26
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 30 0.79
AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical ... 30 1.0
U29154-1|AAA68417.3| 444|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 29 1.8
Z75526-3|CAA99769.1| 578|Caenorhabditis elegans Hypothetical pr... 28 3.2
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 3.2
U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 27 5.6
AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical ... 27 5.6
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 27 5.6
AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical ... 27 5.6
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 24 6.7
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 27 7.4
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 27 7.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 7.4
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 27 9.8
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 9.8
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 27 9.8
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 27 9.8
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 27 9.8
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 27 9.8
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 27 9.8
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 27 9.8
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 9.8
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 9.8
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 9.8
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 77.4 bits (182), Expect = 5e-15
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQTA 425
+ G++GDNFYVI+ G DV V E V+ EG GSFGELAL+Y P AA+V ++T
Sbjct: 119 EQGEEGDNFYVIDKGTVDVYVNH----EYVLTINEG-GSFGELALIYGTPRAATVIAKTD 173
Query: 426 GALWAMDRHTFRRILLKSAFKK 491
LWA+DR T+RRIL+ S KK
Sbjct: 174 VKLWAIDRLTYRRILMGSVTKK 195
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVT-GDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQT 422
+ G GD F++I G +VL DD VV S FGE+AL+ + P AA+V ++T
Sbjct: 237 EQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 296
Query: 423 AGALWAMDRHTFRRIL 470
+DR+ F R++
Sbjct: 297 HLKCIKLDRNRFERVM 312
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 5 EPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLD 178
EPP R RR + AE P ++D E V PK DA R L A+R LLF L+
Sbjct: 42 EPP-KRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLE 95
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 77.4 bits (182), Expect = 5e-15
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQTA 425
+ G++GDNFYVI+ G DV V E V+ EG GSFGELAL+Y P AA+V ++T
Sbjct: 151 EQGEEGDNFYVIDKGTVDVYVNH----EYVLTINEG-GSFGELALIYGTPRAATVIAKTD 205
Query: 426 GALWAMDRHTFRRILLKSAFKK 491
LWA+DR T+RRIL+ S KK
Sbjct: 206 VKLWAIDRLTYRRILMGSVTKK 227
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVT-GDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQT 422
+ G GD F++I G +VL DD VV S FGE+AL+ + P AA+V ++T
Sbjct: 269 EQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 328
Query: 423 AGALWAMDRHTFRRIL 470
+DR+ F R++
Sbjct: 329 HLKCIKLDRNRFERVM 344
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 5 EPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLD 178
EPP R RR + AE P ++D E V PK DA R L A+R LLF L+
Sbjct: 74 EPP-KRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLE 127
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 77.4 bits (182), Expect = 5e-15
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQTA 425
+ G++GDNFYVI+ G DV V E V+ EG GSFGELAL+Y P AA+V ++T
Sbjct: 161 EQGEEGDNFYVIDKGTVDVYVNH----EYVLTINEG-GSFGELALIYGTPRAATVIAKTD 215
Query: 426 GALWAMDRHTFRRILLKSAFKK 491
LWA+DR T+RRIL+ S KK
Sbjct: 216 VKLWAIDRLTYRRILMGSVTKK 237
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVT-GDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQT 422
+ G GD F++I G +VL DD VV S FGE+AL+ + P AA+V ++T
Sbjct: 279 EQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 338
Query: 423 AGALWAMDRHTFRRIL 470
+DR+ F R++
Sbjct: 339 HLKCIKLDRNRFERVM 354
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 5 EPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLD 178
EPP R RR + AE P ++D E V PK DA R L A+R LLF L+
Sbjct: 84 EPP-KRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLE 137
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 74.9 bits (176), Expect = 3e-14
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQTA 425
+ G++GDNFYVI+ G DV V E V+ EG GSFGELAL+Y P AA+V ++
Sbjct: 161 EQGEEGDNFYVIDKGTVDVYVNH----EYVLTINEG-GSFGELALIYGTPRAATVIAKID 215
Query: 426 GALWAMDRHTFRRILLKSAFKK 491
LWA+DR T+RRIL+ S KK
Sbjct: 216 VKLWAIDRLTYRRILMGSVTKK 237
Score = 44.0 bits (99), Expect = 6e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVT-GDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQT 422
+ G GD F++I G +VL DD VV S FGE+AL+ + P AA+V ++T
Sbjct: 279 EQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSDYFGEIALLLDRPRAATVVAKT 338
Query: 423 AGALWAMDRHTFRRIL 470
+DR+ F R++
Sbjct: 339 HLKCIKLDRNRFERVM 354
Score = 36.3 bits (80), Expect = 0.012
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 5 EPPVARFNNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSLD 178
EPP R RR + AE P ++D E V PK DA R L A+R LLF L+
Sbjct: 84 EPP-KRSGGRRTGISAE---PIKEDDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLE 137
>U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical
protein C09G4.2a protein.
Length = 581
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/91 (36%), Positives = 52/91 (57%)
Frame = +3
Query: 219 EIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPL 398
E+ A + + GD G YVI+ G V V D+R V T E FGELA++++
Sbjct: 56 EVPAGAIIIRQGDLGSIMYVIQEG--KVQVVKDNRF---VRTMEDGALFGELAILHHCER 110
Query: 399 AASVRSQTAGALWAMDRHTFRRILLKSAFKK 491
A+VR+ + LWA++R+ F I+++SA +K
Sbjct: 111 TATVRAIESCHLWAIERNVFHAIMMESAREK 141
>U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical
protein C09G4.2c protein.
Length = 617
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/91 (36%), Positives = 52/91 (57%)
Frame = +3
Query: 219 EIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPL 398
E+ A + + GD G YVI+ G V V D+R V T E FGELA++++
Sbjct: 92 EVPAGAIIIRQGDLGSIMYVIQEG--KVQVVKDNRF---VRTMEDGALFGELAILHHCER 146
Query: 399 AASVRSQTAGALWAMDRHTFRRILLKSAFKK 491
A+VR+ + LWA++R+ F I+++SA +K
Sbjct: 147 TATVRAIESCHLWAIERNVFHAIMMESAREK 177
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +3
Query: 204 CDVRKEIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALM 383
C RA + Q G+ GD +V+ G V R ++ GELA++
Sbjct: 185 CMYEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAIL 239
Query: 384 YNMPLAASVRSQTAGALWAMDRHTFRRI 467
YN ASV++ T LW +DR F+ I
Sbjct: 240 YNCTRTASVQALTDVQLWVLDRSVFQMI 267
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +3
Query: 204 CDVRKEIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALM 383
C RA + Q G+ GD +V+ G V R ++ GELA++
Sbjct: 179 CMYEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAIL 233
Query: 384 YNMPLAASVRSQTAGALWAMDRHTFRRI 467
YN ASV++ T LW +DR F+ I
Sbjct: 234 YNCTRTASVQALTDVQLWVLDRSVFQMI 261
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +3
Query: 204 CDVRKEIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALM 383
C RA + Q G+ GD +V+ G V R ++ GELA++
Sbjct: 173 CMYEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAIL 227
Query: 384 YNMPLAASVRSQTAGALWAMDRHTFRRI 467
YN ASV++ T LW +DR F+ I
Sbjct: 228 YNCTRTASVQALTDVQLWVLDRSVFQMI 255
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +3
Query: 204 CDVRKEIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALM 383
C RA + Q G+ GD +V+ G V R ++ GELA++
Sbjct: 216 CMYEMRARAGQWVIQEGEPGDRLFVVAEGELQV-----SREGALLGKMRAGTVMGELAIL 270
Query: 384 YNMPLAASVRSQTAGALWAMDRHTFRRI 467
YN ASV++ T LW +DR F+ I
Sbjct: 271 YNCTRTASVQALTDVQLWVLDRSVFQMI 298
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 210 VRKEIRARRVRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYN 389
V + + A V + G+ G +Y++ G +V V G K+V FG+LAL+ +
Sbjct: 589 VEQYVHAGSVVFRQGEIGVYWYIVLKGAVEVNVNG-----KIVCLLREGDDFGKLALVND 643
Query: 390 MPLAASVRSQTAGALW-AMDRHTFRRIL 470
+P AA++ + +++ +D+H F +IL
Sbjct: 644 LPRAATIVTYEDDSMFLVVDKHHFNQIL 671
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -2
Query: 206 ASRTCCICARQENGTAVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICADC 27
A TCC C G+A PGPP DG + + R G ++ +K + C DC
Sbjct: 79 AEGTCCSCGV---GSAGPPGPPGFDGSAGKDGSNGRPGNPGEDADGDDYKPDASQFCFDC 135
Query: 26 *SAP 15
AP
Sbjct: 136 PEAP 139
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 32.7 bits (71), Expect = 0.15
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -2
Query: 206 ASRTCCICARQENGTAVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICADC 27
A TCC C G+A PGPP DG + + R G ++ +K + C DC
Sbjct: 132 AEGTCCSCGV---GSAGPPGPPGFDGSAGKDGSNGRPGNPGEDADGDDYKPDASQFCFDC 188
Query: 26 *SAP 15
AP
Sbjct: 189 PEAP 192
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 252 GDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMY---NMPLAASVRSQT 422
GD G Y+I G+ V+ G D EK+ FGE++L+ N AS+R++
Sbjct: 569 GDVGKEMYIINQGILQVV--GGDHNEKIFAELAQGAVFGEISLLAIGGNNRRTASIRAKG 626
Query: 423 AGALWAMDRHTFRRIL 470
L+ + + ++
Sbjct: 627 YCTLFVLAKEDLNDVI 642
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 252 GDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMY---NMPLAASVRSQT 422
GD G Y+I G+ V+ G D EK+ FGE++L+ N AS+R++
Sbjct: 569 GDVGKEMYIINQGILQVV--GGDHNEKIFAELAQGAVFGEISLLAIGGNNRRTASIRAKG 626
Query: 423 AGALWAMDRHTFRRIL 470
L+ + + ++
Sbjct: 627 YCTLFVLAKEDLNDVI 642
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 252 GDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMY---NMPLAASVRSQT 422
GD G Y+I G+ V+ G D EK+ FGE++L+ N AS+R++
Sbjct: 569 GDVGKEMYIINQGILQVV--GGDHNEKIFAELAQGAVFGEISLLAIGGNNRRTASIRAKG 626
Query: 423 AGALWAMDRHTFRRIL 470
L+ + + ++
Sbjct: 627 YCTLFVLAKEDLNDVI 642
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 30.3 bits (65), Expect = 0.79
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -2
Query: 161 AVCPGPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICAD 30
+ P PP + G+ + ++G R + KS +K++C D
Sbjct: 80 SAAPAPPAKSGVPAKSAEKAKEGSQRSARLKKEQKSEKKKVCVD 123
>AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical
protein Y50C1A.1 protein.
Length = 642
Score = 29.9 bits (64), Expect = 1.0
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 93 PLPCSPSRTHREPVSLRRSGAYCCSVLLTRT 185
PL C PS+ HR P+ L A+ ++L RT
Sbjct: 273 PLECPPSQCHRSPLVLCYDSAHFSPLVLMRT 303
>U29154-1|AAA68417.3| 444|Caenorhabditis elegans Hypothetical
protein T07F12.3 protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 110 KSDAQRARLAEAVRGILLFRSLDAHKCSRFW 202
K+ A + +AVRGI + SLD +K S+ W
Sbjct: 130 KTAAGTPSIVKAVRGITVIESLDLNKISKTW 160
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -1
Query: 222 SLSEHRIQNLLHLCASRERNSSMPRTASARRALCASDLG 106
++S H+ ++ + LC R + A++R+ +C +DLG
Sbjct: 635 TMSYHKRRSEIELCFESNRTVDESQGAASRKVICLTDLG 673
>Z75526-3|CAA99769.1| 578|Caenorhabditis elegans Hypothetical
protein C06H2.3 protein.
Length = 578
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 50 AETYDPEEDDSDEGAPAVFPKSDAQRARLAE 142
+E DP +D D +PA+ PK +A + RL +
Sbjct: 157 SEKADPSYEDYDARSPAMLPKIEAFKQRLED 187
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 215 PNIASRTCCICARQENGTAVCPGPPQRDG 129
P+ A+ +CC C + G PGPP RDG
Sbjct: 98 PSSAAGSCCTC---QVGPPGPPGPPGRDG 123
>U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical
protein C06G1.4 protein.
Length = 641
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 279 IENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQTAGALWA 440
I+N ++ + GD + V + + SFGEL + S+ SQ A +W+
Sbjct: 85 IQNTDYEKQIWGDPPLSDVQYPLQPHASFGELNSLGGQSAPWSIGSQPAHPVWS 138
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 62 DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGI 157
+PEE ++D P KSD ++ + E V G+
Sbjct: 336 EPEEPENDSNVPEAEEKSDEEQEIMMEDVEGL 367
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = -2
Query: 200 RTCCICARQENGTAVCP---GPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICAD 30
+TCC C E G A P G P DG + +P G + +G + C D
Sbjct: 85 QTCCSCGIGETGPAGVPGQEGAPGNDGKAGQP------GAPGADADEQGFHYKAPEFCFD 138
Query: 29 C*SAPLAAL 3
C + P A+
Sbjct: 139 CPAGPPGAV 147
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = -2
Query: 200 RTCCICARQENGTAVCP---GPPQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICAD 30
+TCC C E G A P G P DG + +P G + +G + C D
Sbjct: 85 QTCCSCGIGETGPAGVPGQEGAPGNDGKAGQP------GAPGADADEQGFHYKAPEFCFD 138
Query: 29 C*SAPLAAL 3
C + P A+
Sbjct: 139 CPAGPPGAV 147
>AL032632-7|CAA21586.1| 313|Caenorhabditis elegans Hypothetical
protein Y11D7A.11 protein.
Length = 313
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 206 ASRTCCICARQENGTAVCPGPPQRDGL 126
+S +CC C G A PG P RDG+
Sbjct: 114 SSDSCCSCGIGLAGPAGFPGRPGRDGI 140
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 62 DPEEDDSDEGAPAVFPKSDAQRARLAEAVRGI 157
+PEE ++D P KSD ++ + E V G+
Sbjct: 336 EPEEPENDSNVPEAEEKSDEEQEIMMEDVEGL 367
>AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical
protein B0454.8 protein.
Length = 642
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2
Query: 278 DVEVVAVIPCLITYSPGSDLFPNIA 204
D E VA P LITY G D P +A
Sbjct: 175 DPEPVACDPALITYGVGDDQTPEVA 199
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2
Query: 206 ASRTCCICARQENGTAVCPGPPQRDG 129
A CC C + G PG P +DG
Sbjct: 85 ADAQCCTCQQGPPGPDGEPGTPGKDG 110
Score = 21.4 bits (43), Expect(2) = 6.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 152 PGPPQRDGLSVRP 114
PGPP +DG+ P
Sbjct: 151 PGPPGQDGIPGNP 163
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 35 RKSVFAETYDPEEDDSDEGAPA 100
+K++F+ D +EDD DEGA A
Sbjct: 363 KKTLFSGPPDSDEDDDDEGAGA 384
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 27.1 bits (57), Expect = 7.4
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 26 NNRRKSVFAETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILL-FRSLDAHKCSRFW 202
N R K E+ DDSD+G F + + + + RG L R+ +KC W
Sbjct: 80 NKRAKKCTVESDSSSSDDSDQGDDCEFIPACDETQEVPKIKRGYTLRTRASVKNKCDDSW 139
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 230 GSDLFPN--IASRTCCICARQENGTAVCPGPP 141
G DLFPN S +CC +++ A CP PP
Sbjct: 46 GCDLFPNRSCCSSSCC-SSQKPIPLACCPPPP 76
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 50 AETYDPEEDDSDEGAPAVFPKSDAQRARLAEAVRGILLFRSL 175
+E Y+PEE++ D+ A FP + R ++ + +R +
Sbjct: 671 SEPYEPEEEEDDD-ATTQFPVPERSRKSSSQLAYSVSFYRKI 711
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -3
Query: 487 LNALLSRMRRNVWRSMAHRAPAVWDRTDAASGMLYIRASSPNEPEPSYVWTTFSTR 320
++A + R +R P VW +T + +L AS+P + S+ TT +TR
Sbjct: 320 ISASANEACRTCYRVRRRIHPPVWAQTAQSKTVLCDCASTPTDTNFSFAPTTSTTR 375
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 389 VVHQGQFAKRTGTFVCVDHLFDAVVSGDQ 303
V+H RTGTF+ +D + D ++ D+
Sbjct: 1010 VIHCSAGVGRTGTFISIDSMLDQCLAEDK 1038
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 389 VVHQGQFAKRTGTFVCVDHLFDAVVSGDQ 303
V+H RTGTF+ +D + D ++ D+
Sbjct: 1045 VIHCSAGVGRTGTFISIDSMLDQCLAEDK 1073
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 21 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTH 122
A+ + NP SPR TP TK P+ SP + H
Sbjct: 633 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEH 662
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 389 VVHQGQFAKRTGTFVCVDHLFDAVVSGDQ 303
V+H RTGTF+ +D + D ++ D+
Sbjct: 1010 VIHCSAGVGRTGTFISIDSMLDQCLAEDK 1038
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 21 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTH 122
A+ + NP SPR TP TK P+ SP + H
Sbjct: 597 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEH 626
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 21 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTH 122
A+ + NP SPR TP TK P+ SP + H
Sbjct: 600 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEH 629
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 21 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTH 122
A+ + NP SPR TP TK P+ SP + H
Sbjct: 6645 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEH 6674
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 26.6 bits (56), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 21 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTH 122
A+ + NP SPR TP TK P+ SP + H
Sbjct: 7285 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEH 7314
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -3
Query: 487 LNALLSRMRRNVWRSMAHRAPAVWDRTDAASGMLYIRASSPNEPEPSYVWTTFSTR 320
++A + R +R P VW +T + +L AS+P + S+ TT +TR
Sbjct: 320 ISASANEACRTCYRVRRRIHPPVWAQTAQSKTVLCDCASTPTDTNFSFAPTTSTTR 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,556,708
Number of Sequences: 27780
Number of extensions: 253451
Number of successful extensions: 1177
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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