Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0400X.Seq
(492 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 39 0.002
At5g37500.1 68418.m04516 guard cell outward rectifying K+ channe... 36 0.015
At1g18500.1 68414.m02309 2-isopropylmalate synthase, putative st... 36 0.015
At4g32650.2 68417.m04648 inward rectifying potassium channel, pu... 33 0.10
At4g32650.1 68417.m04647 inward rectifying potassium channel, pu... 33 0.10
At4g23540.1 68417.m03392 expressed protein probable membrane pro... 32 0.24
At3g08670.1 68416.m01007 expressed protein 31 0.32
At5g15680.1 68418.m01834 expressed protein 30 0.97
At1g77460.1 68414.m09020 C2 domain-containing protein / armadill... 29 1.7
At5g04640.1 68418.m00470 MADS-box family protein SLM3 MADS-box p... 29 2.2
At5g50860.1 68418.m06302 protein kinase family protein contains ... 28 3.0
At2g19440.1 68415.m02269 glycosyl hydrolase family 17 protein si... 28 3.0
At5g40590.1 68418.m04926 DC1 domain-containing protein predicted... 28 3.9
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 3.9
At4g33480.1 68417.m04755 expressed protein 27 5.2
At1g57850.1 68414.m06564 Toll-Interleukin-Resistance (TIR) domai... 27 5.2
At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein si... 27 6.9
At1g64760.1 68414.m07343 glycosyl hydrolase family 17 protein si... 27 6.9
At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi do... 27 6.9
At5g59780.3 68418.m07494 myb family transcription factor (MYB59)... 27 9.1
At5g59780.2 68418.m07493 myb family transcription factor (MYB59)... 27 9.1
At5g59780.1 68418.m07492 myb family transcription factor (MYB59)... 27 9.1
At4g29050.1 68417.m04155 lectin protein kinase family protein co... 27 9.1
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 27 9.1
At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein si... 27 9.1
At2g41330.1 68415.m05102 glutaredoxin family protein contains Pf... 27 9.1
At2g17740.1 68415.m02055 DC1 domain-containing protein 27 9.1
At2g03300.1 68415.m00286 Toll-Interleukin-Resistance (TIR) domai... 27 9.1
At2g03030.1 68415.m00256 Toll-Interleukin-Resistance (TIR) domai... 27 9.1
At1g44120.1 68414.m05096 C2 domain-containing protein / armadill... 27 9.1
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +3
Query: 246 QTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRSQTA 425
+ G D Y + +GV + + D E++V + SFGE++++ N+P +VR
Sbjct: 432 EQGSVVDQLYFVCHGVLEEIGITKDGSEEIVAVLQPDHSFGEISILCNIPQPYTVRVAEL 491
Query: 426 GALWAMDRHTFRRIL 470
+ +D+ +F IL
Sbjct: 492 CRILRLDKQSFMNIL 506
>At5g37500.1 68418.m04516 guard cell outward rectifying K+ channel
(GORK) identical to guard cell outward rectifying K+
channel [Arabidopsis thaliana] gi|11414742|emb|CAC17380;
member of the 1 pore, 6 transmembrane (1P/6TM) Shaker K+
channel family, PMID:11500563
Length = 820
Score = 35.9 bits (79), Expect = 0.015
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +3
Query: 237 VRNQTGDDGDNFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPLAASVRS 416
V + G+ D+ Y + G+ + LVT D E+ V SFG+++++ N+ +VR
Sbjct: 412 VITEQGNVVDHLYFVCEGLLEALVTKTDGSEESVTLLGPHTSFGDISIICNISQPFTVRV 471
Query: 417 QTAGALWAMDRHTFRRIL 470
L +D+ +F IL
Sbjct: 472 CELCHLLRLDKQSFSNIL 489
>At1g18500.1 68414.m02309 2-isopropylmalate synthase, putative
strong similarity to 2-isopropylmalate synthase (IMS1)
[Arabidopsis thaliana] GI:12330687; contains Pfam
profile PF00682: HMGL-like
Length = 631
Score = 35.9 bits (79), Expect = 0.015
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = -3
Query: 346 YVWTTFSTRSSPVTRTSK-TPFSMT*KLSPSS--PV*LRTRRARISFRTSHPEPAAFVRV 176
Y TT +T S T +SK TP S + + PS + LR++ R+S S P P
Sbjct: 12 YSSTTITTTSFLPTFSSKPTPISSSFRFQPSHHRSISLRSQTLRLSCSISDPSPLPPHTP 71
Query: 175 KRTEQQYAPDRLSE 134
+R +Y P+R+S+
Sbjct: 72 RRPRPEYIPNRISD 85
>At4g32650.2 68417.m04648 inward rectifying potassium channel,
putative (KAT3) (AKT4) (KC1) identical to K+ inward
rectifying channel protein KC1 [Arabidopsis thaliana]
gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel
[Arabidopsis thaliana] gi|1165000|emb|CAA63601;
Shaker-type channel (1P/6TM), PMID:11500563
Length = 597
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 NFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSF-GELALMYNMPLAASVRSQTAGALWAM 443
+FYVI +G D++ + V + V G GS GE+ +++N+P +VR++ + +
Sbjct: 442 DFYVIVSGGVDIIASKG--VSEQVLAKLGPGSMAGEIGVVFNIPQPFTVRTRRLSQVIRI 499
Query: 444 DRHTFRRIL 470
H F+ ++
Sbjct: 500 GHHKFKEMV 508
>At4g32650.1 68417.m04647 inward rectifying potassium channel,
putative (KAT3) (AKT4) (KC1) identical to K+ inward
rectifying channel protein KC1 [Arabidopsis thaliana]
gi|4090537|gb|AAC98810; similar to (KAT1) K+ channel
[Arabidopsis thaliana] gi|1165000|emb|CAA63601;
Shaker-type channel (1P/6TM), PMID:11500563
Length = 662
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 267 NFYVIENGVFDVLVTGDDRVEKVVHTYEGSGSF-GELALMYNMPLAASVRSQTAGALWAM 443
+FYVI +G D++ + V + V G GS GE+ +++N+P +VR++ + +
Sbjct: 442 DFYVIVSGGVDIIASKG--VSEQVLAKLGPGSMAGEIGVVFNIPQPFTVRTRRLSQVIRI 499
Query: 444 DRHTFRRIL 470
H F+ ++
Sbjct: 500 GHHKFKEMV 508
>At4g23540.1 68417.m03392 expressed protein probable membrane
protein YPL012w, Saccharomyces cerevisiae, PIR2:S59681
Length = 675
Score = 31.9 bits (69), Expect = 0.24
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = -3
Query: 394 GMLYIRASSPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSSPV*LRTRRARISF 215
G ++ ++P++ + S++ T RS +T S T + PS R R S
Sbjct: 547 GTRAVQLATPDKHK-SFIETVLENRSGKSKDKEETNESQTTSIDPSRGPRKRNYREASSE 605
Query: 214 RTSHPEPAAFVRVKRTEQQYAP 149
T+ + F R KRT QQ+ P
Sbjct: 606 TTAKQDGNKFKRQKRTYQQHTP 627
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 31.5 bits (68), Expect = 0.32
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -3
Query: 433 RAPAVWDRTDAASGMLYIRASSPNEPEPSYVWTTFSTRSSPVTRTSKTPFSMT*KLSPSS 254
R+P+ T +AS YIR SSP+ S + TR+S +R+S TP + S SS
Sbjct: 174 RSPSSILNTSSASVSSYIRPSSPSSRSSSSARPSTPTRTSSASRSS-TPSRIRPGSSSSS 232
Query: 253 PV*LR-TRRARISFRTSHPEPAA 188
R + +R S TS P+ +A
Sbjct: 233 MDKARPSLSSRPSTPTSRPQLSA 255
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 29.9 bits (64), Expect = 0.97
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +3
Query: 93 PLPCSPSRTHREPVSLRRSGAYCCSVLLTRTNAAGSGCDVRKEIRARRVRNQTGDDGDNF 272
PL P + PV+ RSG +L + NA+G VR + R R+ + D GD
Sbjct: 1458 PLSPMPPELNIVPVATGRSG----QLLPSLVNASGPLMGVRSSTGSLRSRHVSRDSGDYL 1513
Query: 273 YVIENGVFDVLVTG 314
N DVL +G
Sbjct: 1514 IDTPNSGEDVLHSG 1527
>At1g77460.1 68414.m09020 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2110
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 368 AKRTGTFVCVDHLFDAVVSGDQDVENAVLD 279
A TF C+ HL A+ SG +DV+ VLD
Sbjct: 1899 ASEAATF-CIPHLVGALKSGVEDVQGLVLD 1927
>At5g04640.1 68418.m00470 MADS-box family protein SLM3 MADS-box
protein, S.latifolia, EMBL:SLSLM3
Length = 322
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -2
Query: 473 EQDAAERVAVHGPQSAGGLGPYRCCQRHVVHQGQFAKRTGTFVCVDHLFDAVVSGDQDVE 294
E+D ++ +HG P C V+ F K T F +D +FD V + +
Sbjct: 129 EEDVKKKGVLHGTHQKQTFNPESCS----VNFDGFNKNTEEFD-LDEIFDYVSTAEALSM 183
Query: 293 NAVLDDVEVV 264
N +DDV VV
Sbjct: 184 NLDMDDVSVV 193
>At5g50860.1 68418.m06302 protein kinase family protein contains
PF00069: Protein kinase domain
Length = 580
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 84 TKEPLPCSPSRTHREPVSLRRSGAYCCSVLLTRTNAAGSGCDVRKEIRARRVRNQTG 254
T EPLPC PS + P S + L + AG G + R R ++TG
Sbjct: 399 TTEPLPCDPSSLPKYPPSKELNVKLRDEELRRQKGLAGKGSGIDGARRIRYRGDRTG 455
>At2g19440.1 68415.m02269 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]; an isoform
contains a non-consensus GA-AG intron
Length = 478
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 124 LCVRLGEHG----RGSFVRIILFGVISLGENGFAPIVKARHWRLF 2
L RLGE+ R +++ + LFG++ AP RHW +F
Sbjct: 284 LLPRLGENRGTPLRPTYIEVYLFGLLDEDAKSIAPGEFERHWGIF 328
>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 234
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -2
Query: 80 NHPLRGHKSRRKR--ICADC 27
NHPLRGHK K IC+ C
Sbjct: 13 NHPLRGHKCEAKDEIICSGC 32
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 27.9 bits (59), Expect = 3.9
Identities = 25/72 (34%), Positives = 31/72 (43%)
Frame = -3
Query: 466 MRRNVWRSMAHRAPAVWDRTDAASGMLYIRASSPNEPEPSYVWTTFSTRSSPVTRTSKTP 287
M N S + VW T ++G + SP+ P PS T ST S P K+P
Sbjct: 45 MLLNTGHSFGYGDSKVWKCT-YSNGSAPAISISPSTPIPS----TPSTPSPPPPAPKKSP 99
Query: 286 FSMT*KLSPSSP 251
T K SPS P
Sbjct: 100 PPPTPKKSPSPP 111
>At4g33480.1 68417.m04755 expressed protein
Length = 336
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 392 HVVHQGQ-FAKRTGTFVCVDHLFDAVVSGDQDVENAVLDDVEV 267
H+VH G + R G D++FD QDVE + VE+
Sbjct: 221 HLVHSGFCYTARGGFCYTEDNVFDFRTDDGQDVEGLPTEGVEI 263
>At1g57850.1 68414.m06564 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 158
Score = 27.5 bits (58), Expect = 5.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 219 EIRARRVRNQTGDDGDNFYVI 281
++RAR VR QTG+ G+ F+ +
Sbjct: 105 KVRARDVRGQTGEFGETFWAL 125
>At5g18220.1 68418.m02138 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 488
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -3
Query: 124 LCVRLGEHGRGSFVRIILFGVISLGENGFAPIVKARHWRLF 2
L G R ++ + LFG I AP RHW +F
Sbjct: 295 LAANRGTPMRPGYIEVYLFGFIDEDAKSIAPGNFERHWGIF 335
>At1g64760.1 68414.m07343 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 481
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 97 RGSFVRIILFGVISLGENGFAPIVKARHWRLF 2
R +++ + LFG++ AP RHW +F
Sbjct: 301 RPTYIEVYLFGLLDEDAKSIAPGPFERHWGIF 332
>At1g31280.1 68414.m03828 PAZ domain-containing protein / piwi
domain-containing protein similar to SP|O04379 Argonaute
protein (AGO1) {Arabidopsis thaliana}, SP|Q9XGW1 PINHEAD
protein (ZWILLE protein) {Arabidopsis thaliana}; contains
Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain
Length = 1013
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 195 LLHLCASRERNSSMPRTASARRALCASDLGN 103
+ H +SRE+N PR AS A AS L +
Sbjct: 961 MYHEASSREKNFKQPRGASTSAASLASSLSS 991
>At5g59780.3 68418.m07494 myb family transcription factor (MYB59)
contains PFAM profile: myb DNA binding domain PF00249
Length = 235
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 123 REPVSLRRSGAYCCSVLLTRTNAAGSGCDVRKEIRARRVRNQTGDDGDNFYVIENGVFDV 302
+ P+S S + CCS +T T + +G K NQ +DG +Y +++ ++
Sbjct: 116 KRPMSPTSSSSNCCSSSMTTTTSQDTGGSNGK-------MNQECEDG--YYSMDDIWREI 166
Query: 303 LVTGDDRVEKVVHTYEGSGSFGELALMYNM-PLAASVRSQTAGALWAMD 446
+G + ++ V Y + E + N PLA+ + ++W MD
Sbjct: 167 DQSGANVIKPVKDNY-----YSEQSCYLNFPPLASPTWESSLESIWNMD 210
>At5g59780.2 68418.m07493 myb family transcription factor (MYB59)
contains PFAM profile: myb DNA binding domain PF00249
Length = 214
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 123 REPVSLRRSGAYCCSVLLTRTNAAGSGCDVRKEIRARRVRNQTGDDGDNFYVIENGVFDV 302
+ P+S S + CCS +T T + +G K NQ +DG +Y +++ ++
Sbjct: 95 KRPMSPTSSSSNCCSSSMTTTTSQDTGGSNGK-------MNQECEDG--YYSMDDIWREI 145
Query: 303 LVTGDDRVEKVVHTYEGSGSFGELALMYNM-PLAASVRSQTAGALWAMD 446
+G + ++ V Y + E + N PLA+ + ++W MD
Sbjct: 146 DQSGANVIKPVKDNY-----YSEQSCYLNFPPLASPTWESSLESIWNMD 189
>At5g59780.1 68418.m07492 myb family transcription factor (MYB59)
contains PFAM profile: myb DNA binding domain PF00249
Length = 170
Score = 26.6 bits (56), Expect = 9.1
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 123 REPVSLRRSGAYCCSVLLTRTNAAGSGCDVRKEIRARRVRNQTGDDGDNFYVIENGVFDV 302
+ P+S S + CCS +T T + +G K NQ +DG +Y +++ ++
Sbjct: 51 KRPMSPTSSSSNCCSSSMTTTTSQDTGGSNGK-------MNQECEDG--YYSMDDIWREI 101
Query: 303 LVTGDDRVEKVVHTYEGSGSFGELALMYNM-PLAASVRSQTAGALWAMD 446
+G + ++ V Y + E + N PLA+ + ++W MD
Sbjct: 102 DQSGANVIKPVKDNY-----YSEQSCYLNFPPLASPTWESSLESIWNMD 145
>At4g29050.1 68417.m04155 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 669
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 24 LTIGANPFSPRLMTPKRMILTKEPLPC 104
+T G P PR +P M+LT L C
Sbjct: 538 ITCGRRPVLPRASSPSEMVLTDWVLDC 564
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1016
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 221 LFPNIASRTCCICARQENGTAVCPGPP 141
LFP AS TC +CA ++ + + PP
Sbjct: 612 LFPRQASLTCNLCALADSSSPIYMCPP 638
>At3g04010.1 68416.m00422 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GB:S12402 [Nicotiana sp],
GB:CAA03908 [Citrus sinensis], GB:S44364 [Lycopersicon
esculentum]
Length = 491
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 124 LCVRLGEHGRGSFVRIILFGVISLGENGFAPIVKARHWRLF 2
L +G R ++ + LFG I AP RHW +F
Sbjct: 300 LANNVGTPMRKGYIEVYLFGFIDEDAKSVAPGNFERHWGIF 340
>At2g41330.1 68415.m05102 glutaredoxin family protein contains Pfam
profile PF00462: Glutaredoxin
Length = 402
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 225 GSLSEHRIQNLLHLCASRERNSSMPRTASARRALCASDLGNT 100
GSL Q L H+ S + N MP T AR + + NT
Sbjct: 69 GSLVLDDRQTLPHISVSGKSNKKMPETEEARDSFSPDSVINT 110
>At2g17740.1 68415.m02055 DC1 domain-containing protein
Length = 248
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Frame = -2
Query: 80 NHPLRGHKSR--RKRICADC 27
NHPLRGHK++ + IC+ C
Sbjct: 13 NHPLRGHKAQVEDEIICSGC 32
>At2g03300.1 68415.m00286 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 203
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 219 EIRARRVRNQTGDDGDNFYVI 281
+++ VR QTG+ GDNF+ +
Sbjct: 100 KVKVEDVRKQTGEFGDNFWTL 120
>At2g03030.1 68415.m00256 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 204
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 219 EIRARRVRNQTGDDGDNFYVI 281
+++ VR QTG+ GDNF+ +
Sbjct: 100 KVKVEDVRKQTGEFGDNFWTL 120
>At1g44120.1 68414.m05096 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2114
Score = 26.6 bits (56), Expect = 9.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 344 CVDHLFDAVVSGDQDVENAVLDDV 273
C+ HL A+ SG+Q+ ++ +D +
Sbjct: 1912 CIPHLIGALKSGEQEARDSAMDTI 1935
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,005,388
Number of Sequences: 28952
Number of extensions: 236748
Number of successful extensions: 967
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 858708096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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