Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0398.Seq
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28) 70 2e-12
SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24) 66 3e-11
SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43) 64 1e-10
SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_22229| Best HMM Match : Arm (HMM E-Value=0) 36 0.027
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 35 0.062
SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 1.0
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 30 2.3
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_46871| Best HMM Match : PAN (HMM E-Value=1) 28 7.2
SB_6382| Best HMM Match : Pkinase_Tyr (HMM E-Value=3e-06) 28 9.5
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_52425| Best HMM Match : Arm (HMM E-Value=9.7e-28)
Length = 234
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +2
Query: 287 KREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLS 466
KRE+ +QKRRNVP+ +E D+ DL+ +VM A + ++P QL AVQ RKLLS
Sbjct: 2 KREDCMQKRRNVPLELP---DEKDEKFQRRDLNAIVMEAGS-DDPSVQLGAVQAARKLLS 57
Query: 467 CDKNPPIDELI 499
DKNPPID+LI
Sbjct: 58 KDKNPPIDDLI 68
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1
Query: 547 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
N +LQFE AWALTNIASGTS QT VV+AGAVP FL+LL S +
Sbjct: 69 NHSLQFEAAWALTNIASGTSEQTQAVVNAGAVPFFLKLLNSPRQ 112
Score = 44.8 bits (101), Expect = 8e-05
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 677 KNVCDQAVWALGNIIGDGPVL 739
++VC+QAVWALGNI+GDGPVL
Sbjct: 112 QHVCEQAVWALGNIVGDGPVL 132
>SB_20122| Best HMM Match : Arm (HMM E-Value=1.2e-24)
Length = 163
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +1
Query: 547 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
NP LQFE AWALTNIASGTS QT V GAVP+F++LL S H+
Sbjct: 34 NPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHD 77
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 437 AVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLT-IQRYSSRPLGL*QT*LPERLHK 613
+VQ RK+LS +K+PPID++I F A LT I +S QT + + +
Sbjct: 13 SVQSVRKMLSKEKSPPIDDVINPLLQ---FEAAWALTNIASGTSE-----QT---KAVQE 61
Query: 614 QTK*SMPVQYLYSFSS*CQLMKNVCDQAVWALGNIIGDGPVL 739
M V+ L S NV +QAVWALGNI GDGP++
Sbjct: 62 GGAVPMFVKLLSSVHD------NVAEQAVWALGNIAGDGPLM 97
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 511 LPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
+P+ V+ LS DN A Q WAL NIA N V+ GA+ L L+
Sbjct: 65 VPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGALGPLLALI 114
>SB_29650| Best HMM Match : Arm (HMM E-Value=7.30076e-43)
Length = 215
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = +1
Query: 547 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
+P LQFE AWALTNIASGTS QT V GAVP+F++LL S H+
Sbjct: 18 HPLLQFEAAWALTNIASGTSEQTKAVQEGGAVPMFVKLLSSVHD 61
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 680 NVCDQAVWALGNIIGDGPVL 739
NV +QAVWALGNI GDGP++
Sbjct: 62 NVAEQAVWALGNIAGDGPLM 81
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 511 LPILVQCLSRA-DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
+P+ V+ LS DN A Q WAL NIA N V+ GA+ L L+
Sbjct: 49 VPMFVKLLSSVHDNVAEQ--AVWALGNIAGDGPLMRNTVIACGALGPLLALI 98
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQ 612
++P LV+ L + L E AWA++N+ +GT+ Q
Sbjct: 175 VVPKLVELLGYPEVNVL--EAAWAISNVTAGTAQQ 207
>SB_2550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 60.9 bits (141), Expect = 1e-09
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 6/89 (6%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD------LDELVMNAANAENPEAQ 430
V+LRK KREE + KRRNV ++ ++ + L T+D L + ++ A +++ E Q
Sbjct: 712 VQLRKAKREEQMFKRRNVEVTRTSSTGSELEELLTSDYMAEGPLFQDMVQAIISDDVEMQ 771
Query: 431 LAAVQQCRKLLSCDKNPPIDELIAAGYSP 517
LAA Q+ RK+LS + NPPID++I G P
Sbjct: 772 LAATQRFRKILSKEPNPPIDDVIKCGVIP 800
>SB_35833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +1
Query: 544 DNPALQFETAWALTNIASGTSAQTNKVVHAGAVPV 648
D +LQFE AWALTNIASGTS QT VV+AG PV
Sbjct: 760 DGHSLQFEAAWALTNIASGTSEQTQAVVNAGDGPV 794
>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
+L ++ CL ++ + ++ E+ W L+N+ +G + VVHAG VPV +++L S
Sbjct: 20 LLHAVMACL-QSSHRHVRKESLWVLSNLTAGPAESCWAVVHAGLVPVTVKMLAS 72
>SB_22229| Best HMM Match : Arm (HMM E-Value=0)
Length = 1050
Score = 36.3 bits (80), Expect = 0.027
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 502 CWILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL 654
C L LV CL D P ++ AWAL IA + + VV AGAVP+ +
Sbjct: 122 CGALDALVICLEEFD-PGVKEAAAWALGYIARHNAELSQAVVDAGAVPLLV 171
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKV 624
+PI+V+CLS N ++F A L N++SGT + NK+
Sbjct: 1218 IPIVVRCLSH-QNDQVRFAAACVLRNLSSGTKSDQNKL 1254
>SB_3360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 547 NPALQFETAWALTNIASGTSAQTNKVVHAGA 639
N LQ E AW +TN+++GT T +V+ A A
Sbjct: 112 NIDLQLEAAWCITNLSAGTHEDTLRVLKAAA 142
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = -2
Query: 495 SSSIGGFLSHESSFLHCCTAANCASGF----SALAAFITSSSRSVVARFLSISSS 343
SSS+ FLS SS T+++ S F S+L+ F+TSS S+++ F+S SSS
Sbjct: 331 SSSLSDFLSLSSSLSDFLTSSSLPSDFLTSSSSLSDFLTSS--SLLSDFISSSSS 383
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 138 ITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRGMKSQ 269
I+ + ET ST + A + NR+++ K A +D +RRR Q
Sbjct: 346 ISEHYTETVSTVQNAIKECINRLNIRKKANGFLDTLRRRSWSGQ 389
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 341 DEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELI 499
++EE+ A L+E V+NAA N L+A++ C K + D P +++
Sbjct: 336 EDEELILQFAEYLLEERVLNAATVSN---HLSAIEYCLKYIHKDSAPVFPDVV 385
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 218 LEHMHAVFRLISR--HFICARCLDTVRGNYTKKQRINIKLLSSKLIKHVLRHYTSDGGLT 45
LEH F + + + IC R LD R YT N+ L S+L+ + DG L
Sbjct: 566 LEHSDCAFMVDNEAIYDICRRNLDIERPTYT-----NLNRLISQLVSSITASLRFDGALN 620
Query: 44 SIFTKYST 21
T++ T
Sbjct: 621 VDLTEFQT 628
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 272 ELRKNKREETLQKRRNVPISYSTDEEEI--DKNLATTDLDELVMNAANAENPEAQLAAVQ 445
++RK K+E+ +KR+ V +++ EEE+ K A++ D+ MN A + + +
Sbjct: 155 KIRKQKQEK--RKRKTVKADFNSSEEEVSSQKTKASSRKDQKKMNKQMANKGKGAKSKKK 212
Query: 446 QCRKLLSCDKNPPIDEL 496
S D+ + EL
Sbjct: 213 TIESNSSDDEEGQVAEL 229
>SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 140 NYTKKQRINIKLLSSKLIKHVLRHYTSDGGLTSIFTKYSTTHK 12
NY ++ + ++ L+S+ + + H D LTS Y+ HK
Sbjct: 128 NYAREHKRDVTSLTSQTLHYAREHKRDDTSLTSQTLHYAREHK 170
>SB_46871| Best HMM Match : PAN (HMM E-Value=1)
Length = 525
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 263 VTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTD 379
V ++ R N QK+ N+P S D E ID++L D
Sbjct: 380 VRLDSRTNSSSSKRQKKTNLPKSGENDVEIIDRSLVRDD 418
>SB_6382| Best HMM Match : Pkinase_Tyr (HMM E-Value=3e-06)
Length = 244
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 435 LLCNNAENCSRVIKTRLLMSS*LLDTPHPSSVPFEG 542
L CN+AE+ ++ +++ + + L D+ HP+ V F G
Sbjct: 28 LKCNSAESETKALESEISLGKSLGDSRHPNIVNFLG 63
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 308 KRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCR 454
K N+P + +T +EE L T D E +N N+ + + L A+Q +
Sbjct: 19 KENNLPRTLATLQEETGITLNTVDSVESFVNEINSGHWDTVLTAIQSLK 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,321,784
Number of Sequences: 59808
Number of extensions: 518423
Number of successful extensions: 1496
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1486
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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