Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0398.Seq
(760 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 77 2e-14
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 71 8e-13
At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMP... 70 1e-12
At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMP... 70 1e-12
At1g02690.2 68414.m00220 importin alpha-2 subunit, putative simi... 70 1e-12
At1g02690.1 68414.m00219 importin alpha-2 subunit, putative simi... 70 1e-12
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP... 68 6e-12
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP... 68 6e-12
At5g49310.1 68418.m06102 importin alpha-1 subunit, putative simi... 67 1e-11
At3g05720.1 68416.m00640 importin alpha-1 subunit, putative simi... 61 7e-10
At5g52000.1 68418.m06453 importin alpha-1 subunit, putative simi... 46 4e-05
At5g03070.1 68418.m00255 armadillo/beta-catenin repeat family pr... 40 0.002
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 32 0.36
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 32 0.36
At1g02570.1 68414.m00208 expressed protein 31 0.83
At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family pr... 30 1.9
At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family pr... 30 1.9
At3g20490.1 68416.m02595 expressed protein 28 5.9
At1g54640.1 68414.m06231 F-box family protein-related contains T... 28 7.7
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
++P +V+ LSR D P LQFE AWALTNIASGTS TN ++ +GAVP+F+QLL S E
Sbjct: 119 VVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASE 175
Score = 65.3 bits (152), Expect = 4e-11
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Frame = +2
Query: 269 VELRKNKREETLQKRR---NVPISYSTDEEEIDKNLATTDLDELVMNAAN--AENPEAQL 433
VE+RKNKREE LQK+R ++ +T + E D + A D L A +E+ +QL
Sbjct: 34 VEIRKNKREENLQKKRFTSSMAFGSATGQTEQDLSSANQLKDNLPAMVAGIWSEDSNSQL 93
Query: 434 AAVQQCRKLLSCDKNPPIDELIAAGYSP---S*FSAFRGLTIQRYSSRPLGL*QT*LPER 604
A RKLLS ++NPPI+E++ +G P S +Q ++ L + E
Sbjct: 94 EATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSEN 153
Query: 605 LHKQTK*SMPVQYLYSFSS*CQLMKNVCDQAVWALGNIIGDGP 733
+ + ++ SS ++V +QAVWALGN+ GD P
Sbjct: 154 TNVIIESGAVPIFIQLLSS---ASEDVREQAVWALGNVAGDSP 193
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
LP+L + + D L + WAL+ ++ ++ + V+ AG VP +QLL
Sbjct: 247 LPVLERLVQSMDEEVLT-DACWALSYLSDNSNDKIQAVIEAGVVPRLIQLL 296
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
++P V+ L+R D P LQFE AWALTNIASGTS T V+ GAVP+F+QLL S
Sbjct: 121 VVPRFVEFLTREDYPQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLAS 174
Score = 55.6 bits (128), Expect = 3e-08
Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNVPISYSTDEEEID-----KNLATTDLDEL--VMNAANAENPEA 427
VE+RK+KREE+LQK+R + + + L L+ L ++ +++
Sbjct: 34 VEIRKSKREESLQKKRREGLQANQLPQFAPLLFLLHQLLEKKLESLPAMVGGVWSDDRSL 93
Query: 428 QLAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPL--GL*QT*LPE 601
QL A Q RKLLS +++PPI+E+I AG P F F LT + Y T +
Sbjct: 94 QLEATTQFRKLLSIERSPPIEEVIDAGVVPR-FVEF--LTREDYPQLQFEAAWALTNIAS 150
Query: 602 RLHKQTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
+ TK + + F +V +QAVWALGN+ GD P
Sbjct: 151 GTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDSP 195
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
LP L + + D L + WAL+ ++ GT+ + V+ AG VP ++LL
Sbjct: 249 LPALERLIHSTDEEVLT-DACWALSYLSDGTNDKIQSVIEAGVVPRLVELL 298
>At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
++P V+ L R D+P LQFE AWALTN+ASGTS T V+ GAVP+F++LL S +
Sbjct: 123 VIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASD 179
Score = 62.9 bits (146), Expect = 2e-10
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Frame = +2
Query: 269 VELRKNKREETLQKRRN--------VPISYSTDEEE----IDKNLATTDLDELVMNAANA 412
VE+RKNKRE++L K+R +P+ D + ++K L + ++ +
Sbjct: 34 VEIRKNKREDSLLKKRREGMMLQQQLPLGAGLDGPQTAAAVEKRLEGIPM---MVQGVYS 90
Query: 413 ENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPLGL*QT* 592
++P+AQL A Q RKLLS +++PPIDE+I AG P F F G T
Sbjct: 91 DDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPR-FVEFLGRHDHPQLQFEAAWALTN 149
Query: 593 LPERLHKQTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
+ T+ + + F +V +QAVWALGN+ GD P
Sbjct: 150 VASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSP 197
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
+LP L L++ +++ E W ++NI +G Q VV AG + + LL +
Sbjct: 334 VLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLVHLLQN 387
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV-PVFLQL 660
+PI V+ L+ A + + + WAL N+A + N V++ GA+ P+ QL
Sbjct: 167 VPIFVKLLTSASDDVRE-QAVWALGNVAGDSPNCRNLVLNYGALEPLLAQL 216
>At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
++P V+ L R D+P LQFE AWALTN+ASGTS T V+ GAVP+F++LL S +
Sbjct: 123 VIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASD 179
Score = 62.9 bits (146), Expect = 2e-10
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Frame = +2
Query: 269 VELRKNKREETLQKRRN--------VPISYSTDEEE----IDKNLATTDLDELVMNAANA 412
VE+RKNKRE++L K+R +P+ D + ++K L + ++ +
Sbjct: 34 VEIRKNKREDSLLKKRREGMMLQQQLPLGAGLDGPQTAAAVEKRLEGIPM---MVQGVYS 90
Query: 413 ENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPLGL*QT* 592
++P+AQL A Q RKLLS +++PPIDE+I AG P F F G T
Sbjct: 91 DDPQAQLEATTQFRKLLSIERSPPIDEVIKAGVIPR-FVEFLGRHDHPQLQFEAAWALTN 149
Query: 593 LPERLHKQTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
+ T+ + + F +V +QAVWALGN+ GD P
Sbjct: 150 VASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSP 197
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
+LP L L++ +++ E W ++NI +G Q VV AG + + LL +
Sbjct: 334 VLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLVHLLQN 387
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV-PVFLQL 660
+PI V+ L+ A + + + WAL N+A + N V++ GA+ P+ QL
Sbjct: 167 VPIFVKLLTSASDDVRE-QAVWALGNVAGDSPNCRNLVLNYGALEPLLAQL 216
>At1g02690.2 68414.m00220 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 539
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHEK 681
++P +VQ LSR D LQFE AWALTNIASGTS T ++ +GAVP+F++LL S E+
Sbjct: 120 VVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEE 177
Score = 61.7 bits (143), Expect = 5e-10
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNV---PISYSTDEEEIDKNLAT-TDLDELVMNAAN--AENPEAQ 430
VE+RKNKREE LQK+R P S ++ +L T T L+ + A +E+ + Q
Sbjct: 34 VEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQMIAGVMSEDRDLQ 93
Query: 431 LAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAF-RGLTIQRYSSRPLGL*QT*LPERL 607
L A R+LLS ++NPPI+E++ +G P R Q L T +
Sbjct: 94 LEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEAAWAL--TNIASGT 151
Query: 608 HKQTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
+ T+ + + F + V +QAVWALGN+ GD P
Sbjct: 152 SENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSP 194
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
LP L + L D L + +WAL+ ++ GT+ + V+ AG +P +QLL
Sbjct: 249 LPALERLLHSTDEEVLT-DASWALSYLSDGTNEKIQTVIDAGVIPRLVQLL 298
>At1g02690.1 68414.m00219 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 538
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHEK 681
++P +VQ LSR D LQFE AWALTNIASGTS T ++ +GAVP+F++LL S E+
Sbjct: 120 VVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEE 177
Score = 61.7 bits (143), Expect = 5e-10
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNV---PISYSTDEEEIDKNLAT-TDLDELVMNAAN--AENPEAQ 430
VE+RKNKREE LQK+R P S ++ +L T T L+ + A +E+ + Q
Sbjct: 34 VEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQMIAGVMSEDRDLQ 93
Query: 431 LAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAF-RGLTIQRYSSRPLGL*QT*LPERL 607
L A R+LLS ++NPPI+E++ +G P R Q L T +
Sbjct: 94 LEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEAAWAL--TNIASGT 151
Query: 608 HKQTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
+ T+ + + F + V +QAVWALGN+ GD P
Sbjct: 152 SENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSP 194
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
LP L + L D L + +WAL+ ++ GT+ + V+ AG +P +QLL
Sbjct: 248 LPALERLLHSTDEEVLT-DASWALSYLSDGTNEKIQTVIDAGVIPRLVQLL 297
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 499 SCWILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
S ++P V+ L + D PA+QFE AWALTNIASGTS T V+ AVP+F+QLL S
Sbjct: 113 SAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLAS 169
Score = 60.5 bits (140), Expect = 1e-09
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNVPISY-----STDEEEIDKNLATTDLDELVMNAANAENPEAQL 433
VE+RK+KREE+L K+R + S +DK L + L ++V + ++P QL
Sbjct: 34 VEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDS--LKDMVAGVWS-DDPALQL 90
Query: 434 AAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPLGL*QT*LPERLHK 613
+ Q RKLLS +++PPI+E+I+AG P F F T +
Sbjct: 91 ESTTQFRKLLSIERSPPIEEVISAGVVPR-FVEFLKKEDYPAIQFEAAWALTNIASGTSD 149
Query: 614 QTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
TK + + F +V +QAVWALGN+ GD P
Sbjct: 150 HTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 666
LP L + + D L + WAL+ ++ GT+ + V+ AG VP ++LL+
Sbjct: 244 LPALERLIHSDDEEVLT-DACWALSYLSDGTNDKIQTVIQAGVVPKLVELLL 294
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHEK 681
++P LV+ L +P++ + NI +G QT V+++GA+P LL H+K
Sbjct: 285 VVPKLVELLLH-HSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKK 341
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 68.1 bits (159), Expect = 6e-12
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 499 SCWILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
S ++P V+ L + D PA+QFE AWALTNIASGTS T V+ AVP+F+QLL S
Sbjct: 113 SAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLAS 169
Score = 60.5 bits (140), Expect = 1e-09
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNVPISY-----STDEEEIDKNLATTDLDELVMNAANAENPEAQL 433
VE+RK+KREE+L K+R + S +DK L + L ++V + ++P QL
Sbjct: 34 VEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDS--LKDMVAGVWS-DDPALQL 90
Query: 434 AAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPLGL*QT*LPERLHK 613
+ Q RKLLS +++PPI+E+I+AG P F F T +
Sbjct: 91 ESTTQFRKLLSIERSPPIEEVISAGVVPR-FVEFLKKEDYPAIQFEAAWALTNIASGTSD 149
Query: 614 QTK*SMPVQYLYSF-SS*CQLMKNVCDQAVWALGNIIGDGP 733
TK + + F +V +QAVWALGN+ GD P
Sbjct: 150 HTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLM 666
LP L + + D L + WAL+ ++ GT+ + V+ AG VP ++LL+
Sbjct: 244 LPALERLIHSDDEEVLT-DACWALSYLSDGTNDKIQTVIQAGVVPKLVELLL 294
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHEK 681
++P LV+ L +P++ + NI +G QT V+++GA+P LL H+K
Sbjct: 285 VVPKLVELLLH-HSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKK 341
>At5g49310.1 68418.m06102 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 519
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
++P V+ L + DNP LQFE AWALTNIASG S T V+ G VP+F+QLL S
Sbjct: 114 VVPRFVEFLKKDDNPKLQFEAAWALTNIASGASEHTKVVIDHGVVPLFVQLLAS 167
Score = 45.2 bits (102), Expect = 5e-05
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAAN------AENPEAQ 430
VE+RK+KR E L K+R V + D L + D E ++ AN +++P Q
Sbjct: 34 VEIRKSKRNENLMKKRRVKVL------PPDYKLISNDPFESLLEIANMITGVFSDDPSLQ 87
Query: 431 LAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPLGL*QT*LPERLH 610
L + R +LS D++PP D +I +G P F F T +
Sbjct: 88 LEYTTRFRVVLSFDRSPPTDNVIKSGVVPR-FVEFLKKDDNPKLQFEAAWALTNIASGAS 146
Query: 611 KQTK*SMPVQYLYSFSS*CQLM----KNVCDQAVWALGNIIGD 727
+ TK + + F QL+ +V +QA+W LGN+ GD
Sbjct: 147 EHTKVVIDHGVVPLF---VQLLASPDDDVREQAIWGLGNVAGD 186
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 499 SCWILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQL 660
+C +LP+L L++ ++ E W ++NI +G Q V+ A +P + L
Sbjct: 322 NCGVLPVLADLLTQNHMRGIRREACWTISNITAGLEEQIQSVIDANLIPSLVNL 375
>At3g05720.1 68416.m00640 importin alpha-1 subunit, putative similar
to importin alpha subunit (Karyopherin alpha subunit)
(KAP alpha) SP:O22478 from [Lycopersicon esculentum]
Length = 528
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHE 678
++P V+ L+ D+P LQFE AWALTNIASGTS T V+ GAV + ++LL S ++
Sbjct: 104 LVPRFVEFLTWDDSPQLQFEAAWALTNIASGTSENTEVVIDHGAVAILVRLLNSPYD 160
Score = 35.9 bits (79), Expect = 0.029
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Frame = +2
Query: 269 VELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQ 448
VE+RK KREE+L K+R + +S + +D+ L ++ ++ + + A Q
Sbjct: 32 VEIRKAKREESLLKKRREALPHSPSADSLDQKL---------ISCIWSDERDLLIEATTQ 82
Query: 449 CRKLLSCDK-NPPIDELIAAGYSPS*FSAFRGLTIQRYSSRPLGL*QT*LPERLHKQTK* 625
R LL + N ++E+I AG P F F LT S L + T
Sbjct: 83 IRTLLCGEMFNVRVEEVIQAGLVPR-FVEF--LTWD--DSPQLQFEAAWALTNIASGTSE 137
Query: 626 SMPVQYLYSFSS*CQLMKN-----VCDQAVWALGNIIGDGP 733
+ V + + + N V +Q VWALGNI GD P
Sbjct: 138 NTEVVIDHGAVAILVRLLNSPYDVVREQVVWALGNISGDSP 178
>At5g52000.1 68418.m06453 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 441
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +1
Query: 508 ILPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
++P LVQ L P LQ+E AWALTNIA VV+ AVPV +QL+ S
Sbjct: 50 VVPRLVQLLKNQVFPKLQYEVAWALTNIAVD---NPGVVVNNNAVPVLIQLIAS 100
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMST 672
LPI+ L+R ++ W ++NI +GT Q V+ A +P+ + L T
Sbjct: 256 LPIISNMLTRNHENKIKKCACWVISNITAGTKEQIQSVIDANLIPILVNLAQDT 309
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSTHEKRM 687
+P LVQ L + +P + + + +G QT V+++GA+P+ +L HE ++
Sbjct: 214 VPKLVQIL-QLPSPVVLVPALLTIGAMTAGNHQQTQCVINSGALPIISNMLTRNHENKI 271
>At5g03070.1 68418.m00255 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 483
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHA 633
+P+LVQCLS E+AW LTNIA+G +T ++ A
Sbjct: 128 IPLLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALLPA 168
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMST 672
L +L+ CL R+++ L+ E AW L+NIA+G S + +++H+ V L ++ST
Sbjct: 311 LQLLIPCL-RSEHRVLKKEAAWVLSNIAAG-SIEHKRMIHSTEVMPLLLRILST 362
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 422 EAQLAAVQQCRKLLSCDKNPPIDELIAAGYSPS*FSAFR-GLTIQRYSSRPLGL*QT*LP 598
+ ++ A+++ R+LLS + PP++ + AG P G ++ L T +
Sbjct: 98 QKRVTALRELRRLLSKSEFPPVEAALRAGAIPLLVQCLSFGSPDEQLLESAWCL--TNIA 155
Query: 599 ERLHKQTK*SMPVQYLYSFSS*CQLMKNVCDQAVWALGNIIGDGPVLSRLL 751
++TK +P L + V +Q WA+GN+ G+G L +L
Sbjct: 156 AGKPEETKALLPALPLLIAHLGEKSSAPVAEQCAWAIGNVAGEGEDLRNVL 206
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 663
LP+L+ L + + + AWA+ N+A N ++ GA+P +++
Sbjct: 169 LPLLIAHLGEKSSAPVAEQCAWAIGNVAGEGEDLRNVLLSQGALPPLARMI 219
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
+P+LV L+ NP + A ALT++ + VVH GAV + L++
Sbjct: 166 VPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCLVARLLT 218
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 511 LPILVQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
+P+LV L+ NP + A ALT++ + VVH GAV + L++
Sbjct: 239 VPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCLVARLLT 291
>At1g02570.1 68414.m00208 expressed protein
Length = 431
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -1
Query: 694 LITYVFHELTSRAEGIQVLHRHGLLCLFVQTFRKLCLLKPKRSRTVTLDCQPSK 533
++ + H L+ + E VLH H +C V + C KR+ + T+ P K
Sbjct: 231 IVFTLIHSLSGKPE-CSVLHSHLYICWIVLFIAQACAFGIKRTMSTTMSINPDK 283
>At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 538 RADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
R+ + +Q A A++NIA+ +T + GA+PV +QLL+S
Sbjct: 295 RSGSKQVQEHIAGAISNIAAVEEIRTT-LAEEGAIPVLIQLLIS 337
>At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 538 RADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 669
R+ + +Q A A++NIA+ +T + GA+PV +QLL+S
Sbjct: 295 RSGSKQVQEHIAGAISNIAAVEEIRTT-LAEEGAIPVLIQLLIS 337
>At3g20490.1 68416.m02595 expressed protein
Length = 458
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 435 ANCASGFSALAAFITSSSRSVVARFLSISSSS 340
A+ ASG S++A+ SSRS + RF + S S
Sbjct: 149 ASAASGISSVASLFQMSSRSPLRRFQLLDSDS 180
>At1g54640.1 68414.m06231 F-box family protein-related contains
TIGRFAM TIGR01640 : F-box protein interaction domain
Length = 245
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = -1
Query: 670 LTSRAEGIQVLHRHGLLCLFVQTFRKLCLLKPKRSRTVTLDCQ-PSKGTE-LGWG---VS 506
L + E + +LH G++CL ++ L + KP + P + T LG+G +S
Sbjct: 36 LPAETEPVCILHCRGMMCLTLKENNDLAIWKPGSEEFKRIPMVIPGQTTNLLGFGYDRIS 95
Query: 505 SSYELINRRVFIT 467
+ Y+++ + F T
Sbjct: 96 NDYKIVTKIGFKT 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,748,384
Number of Sequences: 28952
Number of extensions: 351012
Number of successful extensions: 1095
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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