Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0393.Seq
         (625 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   6.0  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   7.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 235 KTVYQGEAHYVNHHPNQVFWGR 300
           ++   G  +YVNH+     W R
Sbjct: 170 RSAQNGRTYYVNHYTKTTQWSR 191


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = -1

Query: 595 LSGLLSHERIHI*MYLEK*TNRGSAHISPKVPPDAPCSGALSAAGVVVTRSV 440
           LSG+ + ++IH+   ++        H+S +V   +    ALSA  +V  +++
Sbjct: 430 LSGITTEQKIHVDELVQ--------HVSIRVDEGSSSENALSATNIVEAKTI 473


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 476 IKRGGCGGYAQRDRYTCQRPSARS 405
           +K   CGG  +    +C+ P++RS
Sbjct: 517 VKCAACGGPHRIGHMSCEHPASRS 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,522
Number of Sequences: 2352
Number of extensions: 12188
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)